RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 SMAP2Q8WU79 429 aaPredicted RBP17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 MRRFQ96E11 262 aaKnown RBP17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 NSUN5Q96P11 429 aaKnown RBP17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 OR10A4Q9H209 315 aa17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 GIMAP4Q9NUV9 329 aa17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 FLRT3Q9NZU0 649 aa17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 WHRNQ9P202 907 aa17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 PCTPQ9UKL6 214 aa17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 MCTS1Q9ULC4 181 aaKnown RBP17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 ABCG2Q9UNQ0 655 aa17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 MAGED1Q9Y5V3 778 aaPredicted RBP17.56■□□□□ 0.4
PRKCSH-216ENST00000592445 ZSCAN12O43309 604 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 GMFGO60234 142 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 IGHV4-39P01824 125 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 FAM157CP0CG43 387 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 FAPQ12884 760 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 GGTA1PQ4G0N0 100 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 GGNQ86UU5 652 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 CCDC25Q86WR0 208 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 SAMD14Q8IZD0 417 aaPredicted RBP17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 STEAP2Q8NFT2 490 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 LILRB1Q8NHL6 650 aaPredicted RBP17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 S100PBPQ96BU1 408 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 HS6ST2Q96MM7 605 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 GPR78Q96P69 363 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 C12orf49Q9H741 205 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 BRF2Q9HAW0 419 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 SNX6Q9UNH7 406 aa17.55■□□□□ 0.4
PRKCSH-216ENST00000592445 A0A1W2PP18 115 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 SHISA8B8ZZ34 492 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 HAX1O00165 279 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 SYNGR4O95473 234 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 IL3P08700 152 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 DANCRP0C864 163 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 PSMB1P20618 241 aaKnown RBP17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 PAFAH1B1P43034 410 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 ZNF844Q08AG5 666 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 DECR1Q16698 335 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 MARCH3Q86UD3 253 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 OR7G2Q8NG99 324 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 NEUROG1Q92886 237 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 RTN4RQ9BZR6 473 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 VPS11Q9H270 941 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 ESRP2Q9H6T0 727 aaKnown RBP17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 NGBQ9NPG2 151 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 GLRX2Q9NS18 164 aa17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 FAM120CQ9NX05 1096 aaKnown RBP17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 PAQR5Q9NXK6 330 aaPredicted RBP17.54■□□□□ 0.4
PRKCSH-216ENST00000592445 ANK2Q01484 3957 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 PLOD3O60568 738 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 TYK2P29597 1187 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 RFX3P48380 749 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 PSG6Q00889 435 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 CYP27C1Q4G0S4 372 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 TECRLQ5HYJ1 363 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 WDR75Q8IWA0 830 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 FAM9CQ8IZT9 166 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 OR10D3Q8NH80 312 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 HBEGFQ99075 208 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 ERP44Q9BS26 406 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 TBL1XR1Q9BZK7 514 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 ALG2Q9H553 416 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 VPS29Q9UBQ0 182 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 CDC42EP3Q9UKI2 254 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 TMCO1Q9UM00 188 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 VDAC3Q9Y277 283 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 SNX8Q9Y5X2 465 aa17.53■□□□□ 0.4
PRKCSH-216ENST00000592445 GNG14A0A1W2PPG7 69 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 STX16-NPEPL1H3BU86 382 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 STX16O14662 325 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 COQ9O75208 318 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 SMIM24O75264 130 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 OTCP00480 354 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 FESP07332 822 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 CTAGE8P0CG41 777 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 MPIP34949 423 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 MAGEA4P43358 317 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 SERPINB8P50452 374 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 UAP1Q16222 522 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 ZNF672Q499Z4 452 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 NCMAPQ5T1S8 102 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 CTAGE4Q8IX94 777 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 RHNO1Q9BSD3 238 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 HDHD5Q9BXW7 423 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 BARX1Q9HBU1 254 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 SLC35C2Q9NQQ7 365 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 MCM8Q9UJA3 840 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 GDF2Q9UK05 429 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 MRTO4Q9UKD2 239 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 SAR1BQ9Y6B6 198 aa17.52■□□□□ 0.4
PRKCSH-216ENST00000592445 HMX2A2RU54 273 aa17.51■□□□□ 0.39
PRKCSH-216ENST00000592445 CXCL13O43927 109 aa17.51■□□□□ 0.39
PRKCSH-216ENST00000592445 PCDH7O60245 1069 aa17.51■□□□□ 0.39
PRKCSH-216ENST00000592445 GPRIN2O60269 458 aa17.51■□□□□ 0.39
PRKCSH-216ENST00000592445 NDUFS7O75251 213 aa17.51■□□□□ 0.39
PRKCSH-216ENST00000592445 OPN1LWP04000 364 aa17.51■□□□□ 0.39
PRKCSH-216ENST00000592445 TUBBP07437 444 aa17.51■□□□□ 0.39
PRKCSH-216ENST00000592445 RBP1P09455 135 aa17.51■□□□□ 0.39
PRKCSH-216ENST00000592445 IL32P24001 234 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms