RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, human

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPTM1-210	ENST00000589158	MARCH3	Q86UD3	253 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	VPS37A	Q8NEZ2	397 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	OR8J2	Q8NGG1	315 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	OR4A15	Q8NGL6	344 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	OR10Q1	Q8NGQ4	319 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	PIWIL2	Q8TC59	973 aa	Known RBP	12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	SFXN5	Q8TD22	340 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	ADAMTS15	Q8TE58	950 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	CA5BP1	Q8WTZ4	195 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	RNF138	Q8WVD3	245 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	RND1	Q92730	232 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	HOXB13	Q92826	284 aa	Predicted RBP	12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	MOAP1	Q96BY2	351 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	TIMP4	Q99727	224 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	ACTRT3	Q9BYD9	372 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	TBL1XR1	Q9BZK7	514 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	AIG1	Q9NVV5	245 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	TAS2R10	Q9NYW0	307 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	DKKL1	Q9UK85	242 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	CAMK2A	Q9UQM7	478 aa		12.84	□□□□□ -0.35
CLPTM1-210	ENST00000589158	DOPEY2	Q9Y3R5	2298 aa		12.83	□□□□□ -0.35
CLPTM1-210	ENST00000589158	RNASET2	O00584	256 aa	Known RBP	12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ANKRD28	O15084	1053 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CLDN14	O95500	239 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CPSF4	O95639	269 aa	Known RBP	12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	KRT16	P08779	473 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	HOXD4	P09016	255 aa	Predicted RBP	12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	GABRA1	P14867	456 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	BMP7	P18075	431 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	TCEA1	P23193	301 aa	Known RBP	12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	HTR1E	P28566	365 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	SRD5A2	P31213	254 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	S100A3	P33764	101 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	WNT3	P56703	355 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	NUP107	P57740	925 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	UFM1	P61960	85 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	POU6F2	P78424	691 aa	Predicted RBP	12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CRYZ	Q08257	329 aa	Known RBP	12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	GRAMD1B	Q3KR37	738 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	SLC9B1	Q4ZJI4	515 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	SPANXN4	Q5MJ08	99 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CCNJ	Q5T5M9	372 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	SP5	Q6BEB4	398 aa	Predicted RBP	12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ZNF787	Q6DD87	383 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	VASN	Q6EMK4	673 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	RTL6	Q6ICC9	239 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CDC73	Q6P1J9	531 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ANKRD46	Q86W74	232 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ULK2	Q8IYT8	1036 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CLEC4F	Q8N1N0	589 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	DUSP19	Q8WTR2	217 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CDS1	Q92903	461 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ABTB1	Q969K4	478 aa	Predicted RBP	12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	TESC	Q96BS2	214 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ZBTB18	Q99592	522 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	TTYH2	Q9BSA4	534 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	BTBD2	Q9BX70	525 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	UGT2B28	Q9BY64	529 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	OR2B2	Q9GZK3	357 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	DSN1	Q9H410	356 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	PIGU	Q9H490	435 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	DUSP22	Q9NRW4	184 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	MED11	Q9P086	117 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	FAM215A	Q9Y5M1	114 aa		12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.83	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ZGRF1	Q86YA3	2104 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	RNF103-CHMP3	A0A140T963	221 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	PRSS51	A0A1B0GVH4	220 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CYSRT1	A8MQ03	144 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158		C9JVG2	144 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158		E9PBE3	544 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	GMFG	O60234	142 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	DIAPH2	O60879	1101 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ANGPTL1	O95841	491 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ACTL6A	O96019	429 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	GLI4	P10075	376 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	HPGD	P15428	266 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ATP6V1C1	P21283	382 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	DPP4	P27487	766 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	GRN	P28799	593 aa	Known RBP	12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	DCT	P40126	519 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	PPP2R2A	P63151	447 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CDSN	Q15517	529 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	DPY19L1	Q2PZI1	675 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	FAM174B	Q3ZCQ3	159 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	NHSL2	Q5HYW2	709 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	MAVS	Q7Z434	540 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	C6orf120	Q7Z4R8	191 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	IFNE	Q86WN2	208 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	CCDC71	Q8IV32	467 aa	Predicted RBP	12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	PM20D2	Q8IYS1	436 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	OR4C3	Q8NH37	302 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	FAM110B	Q8TC76	370 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ACTRT2	Q8TDY3	377 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	ASB5	Q8WWX0	329 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	MARK4	Q96L34	752 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	TEX37	Q96LM6	180 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	STAC	Q99469	402 aa		12.82	□□□□□ -0.36
CLPTM1-210	ENST00000589158	G6PC3	Q9BUM1	346 aa		12.82	□□□□□ -0.36

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