RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 AP4B1Q9Y6B7 739 aa2.66□□□□□ -1.98
SMAD4-207ENST00000589076 USP6P35125 1406 aa2.66□□□□□ -1.98
SMAD4-207ENST00000589076 RAI1Q7Z5J4 1906 aaPredicted RBP2.66□□□□□ -1.98
SMAD4-207ENST00000589076 METP08581 1390 aa2.65□□□□□ -1.98
SMAD4-207ENST00000589076 A0A1B0GWJ7 208 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 ZSCAN5CA6NGD5 496 aaPredicted RBP2.65□□□□□ -1.99
SMAD4-207ENST00000589076 EFCAB7A8K855 629 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 G3V3Y1 287 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 SAP18O00422 153 aaKnown RBP2.65□□□□□ -1.99
SMAD4-207ENST00000589076 PPIHO43447 177 aaKnown RBP2.65□□□□□ -1.99
SMAD4-207ENST00000589076 BCL2L11O43521 198 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 LANCL1O43813 399 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 JAK2O60674 1132 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 PEX11AO75192 247 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 ZNF253O75346 499 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 RHBDL1O75783 438 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 IDH1O75874 414 aaKnown RBP2.65□□□□□ -1.99
SMAD4-207ENST00000589076 MFN2O95140 757 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 GJB5O95377 273 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 ANP32DO95626 131 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 GUCA1CO95843 209 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 IFNB1P01574 187 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 IGFBP1P08833 259 aaPredicted RBP2.65□□□□□ -1.99
SMAD4-207ENST00000589076 SDC1P18827 310 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 PTMSP20962 102 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 HPDP32754 393 aaPredicted RBP2.65□□□□□ -1.99
SMAD4-207ENST00000589076 CDH5P33151 784 aaPredicted RBP2.65□□□□□ -1.99
SMAD4-207ENST00000589076 CYLC1P35663 651 aaPredicted RBP2.65□□□□□ -1.99
SMAD4-207ENST00000589076 TRPC1P48995 793 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 FNTAP49354 379 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 TMEM41BQ5BJD5 291 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 LGSNQ5TDP6 509 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 MEDAGQ5VYS4 303 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 RNLSQ5VYX0 342 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 PRSS48Q7RTY5 328 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 LRRC70Q7Z2Q7 622 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 ZNF573Q86YE8 665 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 CENPLQ8N0S6 344 aaPredicted RBP2.65□□□□□ -1.99
SMAD4-207ENST00000589076 OR5AU1Q8NGC0 362 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 RSPH1Q8WYR4 309 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 TESK2Q96S53 571 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 HCAR1Q9BXC0 346 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 NFKBIZQ9BYH8 718 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 OPN3Q9H1Y3 402 aaPredicted RBP2.65□□□□□ -1.99
SMAD4-207ENST00000589076 AGPAT5Q9NUQ2 364 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 ELOVL2Q9NXB9 296 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 RDH8Q9NYR8 311 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 GALPQ9UBC7 116 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 PRODH2Q9UF12 536 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 SH3BGRL2Q9UJC5 107 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 ATP6V0A2Q9Y487 856 aa2.65□□□□□ -1.99
SMAD4-207ENST00000589076 CACNA1GO43497 2377 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 CCT8L1PA6NM43 557 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 A8MX80 341 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 FAM220BPB1ANY3 271 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 SDHDO14521 159 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 MAPK13O15264 365 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 ZNF354AO60765 605 aaPredicted RBP2.64□□□□□ -1.99
SMAD4-207ENST00000589076 JCHAINP01591 159 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 CT45A10P0DMU9 189 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 LAMP1P11279 417 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 BCKDHAP12694 445 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 NCF1P14598 390 aaPredicted RBP2.64□□□□□ -1.99
SMAD4-207ENST00000589076 PGAM2P15259 253 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 ACAA2P42765 397 aaKnown RBP2.64□□□□□ -1.99
SMAD4-207ENST00000589076 OR1D4P47884 311 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 ALDH3B2P48448 385 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 PAX2Q02962 417 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 IL18R1Q13478 541 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 RUNX3Q13761 415 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 CYP51A1Q16850 503 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 Q1RN00 199 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 SLC22A6Q4U2R8 563 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 DNAJC21Q5F1R6 531 aaKnown RBP2.64□□□□□ -1.99
SMAD4-207ENST00000589076 RIPPLY2Q5TAB7 128 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 SLX4IPQ5VYV7 408 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 CBLN3Q6UW01 205 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 STAC2Q6ZMT1 411 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 GCNT7Q6ZNI0 430 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 ERASQ7Z444 233 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 LINC00612Q8N6U2 182 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 Q8N9G6 341 aaPredicted RBP2.64□□□□□ -1.99
SMAD4-207ENST00000589076 FADS6Q8N9I5 356 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 VN1R17PQ8TDU5 208 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 SYAP1Q96A49 352 aaPredicted RBP2.64□□□□□ -1.99
SMAD4-207ENST00000589076 UPRTQ96BW1 309 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 PPP1R16AQ96I34 528 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 ZNF416Q9BWM5 594 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 RIBC2Q9H4K1 309 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 GPN2Q9H9Y4 310 aaPredicted RBP2.64□□□□□ -1.99
SMAD4-207ENST00000589076 RBM28Q9NW13 759 aaKnown RBP2.64□□□□□ -1.99
SMAD4-207ENST00000589076 DUSP12Q9UNI6 340 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 AP1M2Q9Y6Q5 423 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 ADAMTS9Q9P2N4 1935 aa2.64□□□□□ -1.99
SMAD4-207ENST00000589076 IGLV3-10A0A075B6K4 115 aa2.63□□□□□ -1.99
SMAD4-207ENST00000589076 LRRC30A6NM36 301 aa2.63□□□□□ -1.99
SMAD4-207ENST00000589076 SLC17A2O00624 439 aa2.63□□□□□ -1.99
SMAD4-207ENST00000589076 TRIM3O75382 744 aaPredicted RBP2.63□□□□□ -1.99
SMAD4-207ENST00000589076 CHRNA1P02708 482 aa2.63□□□□□ -1.99
SMAD4-207ENST00000589076 CSF2P04141 144 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms