RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 ZIM3Q96PE6 472 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 NPAS1Q99742 590 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 PIP5K1AQ99755 562 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 MED18Q9BUE0 208 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 FAIM2Q9BWQ8 316 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 PINK1Q9BXM7 581 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 ACPTQ9BZG2 426 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 ACBD3Q9H3P7 528 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 VIPAS39Q9H9C1 493 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 BRF2Q9HAW0 419 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 SENP1Q9P0U3 644 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 TBK1Q9UHD2 729 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 TRPS1Q9UHF7 1281 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 ADAM21Q9UKJ8 722 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 SNX6Q9UNH7 406 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 TIMM22Q9Y584 194 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 FREM1Q5H8C1 2179 aa10.47□□□□□ -0.73
LIG3-207ENST00000586119 SMIM23A6NLE4 172 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 H3BML4 177 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 DYNC1I1O14576 645 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 PCDH7O60245 1069 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 FADS1O60427 444 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 AQP8O94778 261 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 SUPT7LO94864 414 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 OTCP00480 354 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 OPN1LWP04000 364 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 THBDP07204 575 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 PEPDP12955 493 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 NID1P14543 1247 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 IL12BP29460 328 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 SLC6A8P48029 635 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 DSCR4P56555 118 aaPredicted RBP10.46□□□□□ -0.73
LIG3-207ENST00000586119 EFR3AQ14156 821 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 BCL2A1Q16548 175 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 KRT71Q3SY84 523 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 CEP85LQ5SZL2 805 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 RAET1LQ5VY80 246 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 APOOLQ6UXV4 268 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 CHMP1BQ7LBR1 199 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 MARCH3Q86UD3 253 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 LRRC75A-AS1Q8N1F1 130 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 DUSP19Q8WTR2 217 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 KCNA7Q96RP8 456 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 CCL19Q99731 98 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 MRPL57Q9BQC6 102 aaKnown RBP10.46□□□□□ -0.73
LIG3-207ENST00000586119 KLHL4Q9C0H6 718 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 STMN4Q9H169 189 aaPredicted RBP10.46□□□□□ -0.73
LIG3-207ENST00000586119 MRPL46Q9H2W6 279 aaKnown RBP10.46□□□□□ -0.73
LIG3-207ENST00000586119 SLC35C2Q9NQQ7 365 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 TMEM216Q9P0N5 145 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 PPP4R1LQ9P1A2 415 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 DCDC2Q9UHG0 476 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 MCM8Q9UJA3 840 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 TMCO1Q9UM00 188 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 CLEC4AQ9UMR7 237 aa10.46□□□□□ -0.73
LIG3-207ENST00000586119 OR2M5A3KFT3 312 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 C16orf97H3BN30 126 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 RGS16O15492 202 aaPredicted RBP10.45□□□□□ -0.74
LIG3-207ENST00000586119 KLF4O43474 513 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 DLX3O60479 287 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 PLOD3O60568 738 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 ABCB7O75027 752 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 BCAS2O75934 225 aaPredicted RBP10.45□□□□□ -0.74
LIG3-207ENST00000586119 JUNP05412 331 aaKnown RBP10.45□□□□□ -0.74
LIG3-207ENST00000586119 EVI2BP34910 448 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 KRT20P35900 424 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 KCNJ5P48544 419 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 CCT5P48643 541 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 NR1H2P55055 460 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 EEF1A1P68104 462 aaKnown RBP10.45□□□□□ -0.74
LIG3-207ENST00000586119 PON3Q15166 354 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 EXOC3L2Q2M3D2 409 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 ZNF678Q5SXM1 525 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 C10orf62Q5T681 223 aaPredicted RBP10.45□□□□□ -0.74
LIG3-207ENST00000586119 EEF1A1P5Q5VTE0 462 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 SH2D5Q6ZV89 423 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 TRABD2AQ86V40 505 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 PIGTQ969N2 578 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 TMEM237Q96Q45 408 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 KLHDC3Q9BQ90 382 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 C1QTNF3Q9BXJ4 246 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 RNF122Q9H9V4 155 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 MKS1Q9NXB0 559 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 ZNF226Q9NYT6 803 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 OR10H1Q9Y4A9 318 aa10.45□□□□□ -0.74
LIG3-207ENST00000586119 HIVEP2P31629 2446 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 ALPK2Q86TB3 2170 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 GNG14A0A1W2PPG7 69 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 A0A1W2PPM1 405 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 GXYLT2A0PJZ3 443 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 UPK1AO00322 258 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 EMC8O43402 210 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 GLRA3O75311 464 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 TNFRSF21O75509 655 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 IGKV1D-16P01601 117 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 CRHP06850 196 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 MYZAPP0CAP1 466 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 TBXA2RP21731 343 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 RFX3P48380 749 aa10.44□□□□□ -0.74
LIG3-207ENST00000586119 PTH2RP49190 550 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms