RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 SLIT3O75094 1523 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 IGHV3OR16-12A0A075B7B8 117 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 UQCRHLA0A096LP55 91 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 FAM168BA1KXE4 195 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 GOLGA6L4A6NEF3 574 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 ZSCAN5CA6NGD5 496 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 A8MU10 97 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 K7ERI5 159 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 POLR3GO15318 223 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 NEMFO60524 1076 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 UQCRHP07919 91 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 SFTPBP07988 381 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 SERPINF2P08697 491 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 MBL2P11226 248 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 RPA4Q13156 261 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 PDIA5Q14554 519 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 TRADDQ15628 312 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 HAGHQ16775 308 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 HKDC1Q2TB90 917 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 ZNF528Q3MIS6 628 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 GPAT3Q53EU6 434 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 ODF2Q5BJF6 829 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 HHATQ5VTY9 493 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 RAPH1Q70E73 1250 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 PRSS48Q7RTY5 328 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 SH2D6Q7Z4S9 175 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 LRRC43Q8N309 656 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 C11orf42Q8N5U0 333 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 ARL10Q8N8L6 244 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 DRAXINQ8NBI3 349 aaPredicted RBP2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 ERMNQ8TAM6 284 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 ZNF671Q8TAW3 534 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 RDH11Q8TC12 318 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 LZICQ8WZA0 190 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 CARD9Q9H257 536 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 NRN1Q9NPD7 142 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 STARD5Q9NSY2 213 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 CUTCQ9NTM9 273 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 BLOC1S6Q9UL45 172 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 EMCNQ9ULC0 261 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 RRP15Q9Y3B9 282 aaKnown RBP2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 UBR3Q6ZT12 1888 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 PIK3C2AO00443 1686 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 KIAA0232Q92628 1395 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 ATP10DQ9P241 1426 aa2.85□□□□□ -1.95
HERPUD1-212ENST00000567944 CCDC88AQ3V6T2 1871 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 ZNF318Q5VUA4 2279 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 A0A1B0GUA9 196 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 CCDC69A6NI79 296 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 NDC80O14777 642 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 CASQ2O14958 399 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 ERLIN2O94905 339 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 STAMBPO95630 424 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 OLFM2O95897 454 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 IVLP07476 585 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 DNAH10OSP0CZ25 163 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 UMPSP11172 480 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 KRT13P13646 458 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 P4HA1P13674 534 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 DESP17661 470 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 HOXD10P28358 340 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 OAS2P29728 719 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 PPP2R1BP30154 601 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 EPS15P42566 896 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 ACADSBP45954 432 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 NSFP46459 744 aaKnown RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 CCL11P51671 97 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 MFAP2P55001 183 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 HAND2P61296 217 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 CDKL1Q00532 357 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 PAX2Q02962 417 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 ZNF85Q03923 595 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 ZNF33BQ06732 778 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 CRMP1Q14194 572 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 CD226Q15762 336 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 SLC15A2Q16348 729 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 BOLA3Q53S33 107 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 TCHHL1Q5QJ38 904 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 ACER2Q5QJU3 275 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 UNC45BQ8IWX7 931 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 ZNF713Q8N859 430 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 CCDC26Q8TAB7 109 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 BRSK1Q8TDC3 778 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 ACMSDQ8TDX5 336 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 TBCKQ8TEA7 893 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 TAF4BQ92750 862 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 ZBED6CLQ96FA7 236 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 SPATA13Q96N96 652 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 CPXM1Q96SM3 734 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 FAM213AQ9BRX8 229 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 SLC39A3Q9BRY0 314 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 GPR174Q9BXC1 333 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 RNF41Q9H4P4 317 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 ELL3Q9HB65 397 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 PRMT8Q9NR22 394 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 HOMER3Q9NSC5 361 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 AIPL1Q9NZN9 384 aa2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 AKAP7Q9P0M2 348 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-212ENST00000567944 SPATA7Q9P0W8 599 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms