RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 NADK2Q4G0N4 442 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 CYP27C1Q4G0S4 372 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 KRT80Q6KB66 452 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 MFSD12Q6NUT3 480 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 CDC73Q6P1J9 531 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 C19orf48Q6RUI8 117 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 C16orf47Q6ZP98 133 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-206ENST00000565990 ZBTB49Q6ZSB9 765 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 SLC15A3Q8IY34 581 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 SIRT6Q8N6T7 355 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 SLC16A11Q8NCK7 471 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 OR5AK3PQ8NH89 298 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 FAM110BQ8TC76 370 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 LRRC58Q96CX6 371 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 CNBD2Q96M20 576 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 RDH12Q96NR8 316 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 STACQ99469 402 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 ITPAQ9BY32 194 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 ACTRT3Q9BYD9 372 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 RNF32Q9H0A6 362 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 NXF5Q9H1B4 397 aaKnown RBP11.65□□□□□ -0.54
SF3B3-206ENST00000565990 ADNPQ9H2P0 1102 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 PIGUQ9H490 435 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 SERHL2Q9H4I8 314 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 TPT1P8Q9HAU6 139 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 GPR83Q9NYM4 423 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 PKD1L2Q7Z442 2459 aa11.65□□□□□ -0.54
SF3B3-206ENST00000565990 RNF103-CHMP3A0A140T963 221 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 DUXAA6NLW8 204 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 FXYD1O00168 92 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 CLIC1O00299 241 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 WWP2O00308 870 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 NME4O00746 187 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 ITGA10O75578 1167 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 KRT75O95678 551 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 MATN1P21941 496 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 NR0B1P51843 470 aaKnown RBP11.64□□□□□ -0.55
SF3B3-206ENST00000565990 ATP6AP1Q15904 470 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 ZNF791Q3KP31 576 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-206ENST00000565990 GTDC1Q4AE62 458 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 NHSL2Q5HYW2 709 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 HLA-DQA1Q5Y7H0 255 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 FCRLBQ6BAA4 426 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 NPSR1Q6W5P4 371 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 SATL1Q86VE3 508 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 ERI1Q8IV48 349 aaKnown RBP11.64□□□□□ -0.55
SF3B3-206ENST00000565990 TSPAN14Q8NG11 270 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 OR52E4Q8NGH9 312 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 LRTOMTQ8WZ04 291 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 TFAP2CQ92754 450 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 WBP1Q96G27 269 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 RMND5BQ96G75 393 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-206ENST00000565990 SLC35A4Q96G79 324 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 ABHD17AQ96GS6 310 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 RASL10BQ96S79 203 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 ZBTB20Q9HC78 741 aaPredicted RBP11.64□□□□□ -0.55
SF3B3-206ENST00000565990 DUSP22Q9NRW4 184 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 AGPAT4Q9NRZ5 378 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 NPFFR2Q9Y5X5 522 aa11.64□□□□□ -0.55
SF3B3-206ENST00000565990 C7orf72A4D263 438 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 H0YAE9 185 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 MKRN2OSH3BPM6 223 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 ASNA1O43681 348 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 RASAL1O95294 804 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 GUSBP08236 651 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 ALOX5P09917 674 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 FBXO45P0C2W1 286 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 ACP2P11117 423 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 PPIBP23284 216 aaKnown RBP11.63□□□□□ -0.55
SF3B3-206ENST00000565990 SLC6A2P23975 617 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 GABRA3P34903 492 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 CD96P40200 585 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 HLCSP50747 726 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 ESRRGP62508 458 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 EPS8Q12929 822 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 TP53BP2Q13625 1128 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 LASP1Q14847 261 aaKnown RBP11.63□□□□□ -0.55
SF3B3-206ENST00000565990 ZNHIT3Q15649 155 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-206ENST00000565990 DUSP5Q16690 384 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 SPDYE7PQ495Y7 208 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 TBCELQ5QJ74 424 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 ABHD17BQ5VST6 288 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 HMBOX1Q6NT76 420 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 ZNF227Q86WZ6 799 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 SLC44A2Q8IWA5 706 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-206ENST00000565990 GPALPP1Q8IXQ4 340 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 DND1Q8IYX4 353 aaKnown RBP11.63□□□□□ -0.55
SF3B3-206ENST00000565990 TAGAPQ8N103 731 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 BEST3Q8N1M1 668 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 OR4N2Q8NGD1 307 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 OR52N2Q8NGI0 321 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 THAP3Q8WTV1 239 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-206ENST00000565990 TMEM125Q96AQ2 219 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 NTNG2Q96CW9 530 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 OR7D2Q96RA2 312 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 CGREF1Q99674 301 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 SH2D2AQ9NP31 389 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 ETAA1Q9NY74 926 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 MAGEL2Q9UJ55 1249 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 FAF1Q9UNN5 650 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms