RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 SFRP4Q6FHJ7 346 aaPredicted RBP4.84□□□□□ -1.63
SMG1-211ENST00000565324 CD300LGQ6UXG3 332 aa4.84□□□□□ -1.63
SMG1-211ENST00000565324 IRF2BP1Q8IU81 584 aa4.84□□□□□ -1.63
SMG1-211ENST00000565324 C1orf87Q8N0U7 546 aa4.84□□□□□ -1.63
SMG1-211ENST00000565324 LRRC25Q8N386 305 aaPredicted RBP4.84□□□□□ -1.63
SMG1-211ENST00000565324 KDF1Q8NAX2 398 aaPredicted RBP4.84□□□□□ -1.63
SMG1-211ENST00000565324 ASB13Q8WXK3 278 aa4.84□□□□□ -1.63
SMG1-211ENST00000565324 SNX27Q96L92 541 aa4.84□□□□□ -1.63
SMG1-211ENST00000565324 P2RX7Q99572 595 aaKnown RBP4.84□□□□□ -1.63
SMG1-211ENST00000565324 ARHGAP39Q9C0H5 1083 aa4.84□□□□□ -1.63
SMG1-211ENST00000565324 RRAGCQ9HB90 399 aa4.84□□□□□ -1.63
SMG1-211ENST00000565324 SLC2A4RGQ9NR83 387 aa4.84□□□□□ -1.63
SMG1-211ENST00000565324 TMEM59LQ9UK28 342 aa4.84□□□□□ -1.63
SMG1-211ENST00000565324 UPK3BL1B0FP48 263 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 UPK3BL2E5RIL1 263 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 K7EQM0 130 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 SOCS2O14508 198 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 F10P00742 488 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 KNG1P01042 644 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 SNRNP70P08621 437 aaKnown RBP4.84□□□□□ -1.64
SMG1-211ENST00000565324 SPP1P10451 314 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 ZNF8P17098 575 aaPredicted RBP4.84□□□□□ -1.64
SMG1-211ENST00000565324 MPEG1Q2M385 716 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 RETREG3Q86VR2 466 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 CERS5Q8N5B7 392 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 ZNF454Q8N9F8 522 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 NAXEQ8NCW5 288 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 PTCHD1Q96NR3 888 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 UBL7Q96S82 380 aaPredicted RBP4.84□□□□□ -1.64
SMG1-211ENST00000565324 ADAMTS6Q9UKP5 1117 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 MYOM1P52179 1685 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 TTC24A2A3L6 582 aaPredicted RBP4.84□□□□□ -1.64
SMG1-211ENST00000565324 CCL22O00626 93 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 PPT1P50897 306 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 DAP3P51398 398 aaKnown RBP4.84□□□□□ -1.64
SMG1-211ENST00000565324 GALNT1Q10472 559 aaPredicted RBP4.84□□□□□ -1.64
SMG1-211ENST00000565324 LRIT3Q3SXY7 679 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 C6orf136Q5SQH8 315 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 LPCAT3Q6P1A2 487 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 FAM122BQ7Z309 247 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 OR5L2Q8NGL0 311 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 ADAMTS14Q8WXS8 1223 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 PDZD7Q9H5P4 517 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 DZANK1Q9NVP4 752 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 TMEM225BP0DP42 221 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 GKP32189 559 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 RPS13P62277 151 aaKnown RBP4.84□□□□□ -1.64
SMG1-211ENST00000565324 FKBP1BP68106 108 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 NFATC4Q14934 902 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 SLC10A1Q14973 349 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 METTL2BQ6P1Q9 378 aaKnown RBP4.84□□□□□ -1.64
SMG1-211ENST00000565324 USP50Q70EL3 339 aaPredicted RBP4.84□□□□□ -1.64
SMG1-211ENST00000565324 GCNT2Q8N0V5 402 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 FBXO22Q8NEZ5 403 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 PXT1Q8NFP0 134 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 OR9A2Q8NGT5 310 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 OR52P1PQ8NH57 321 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 SACM1LQ9NTJ5 587 aa4.84□□□□□ -1.64
SMG1-211ENST00000565324 INTS6Q9UL03 887 aaKnown RBP4.84□□□□□ -1.64
SMG1-211ENST00000565324 PPP5D1E7EU14 171 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 TGM5O43548 720 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 TYROBPO43914 113 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 RPS15AP62244 130 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 SPCS2Q15005 226 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 CST9LP1Q5W188 147 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SBSNQ6UWP8 590 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ZDHHC24Q6UX98 284 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 LINC00299Q6ZSB3 139 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SYNPRQ8TBG9 265 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 RADILQ96JH8 1075 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ARPC5LQ9BPX5 153 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 NDUFB2O95178 105 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 JUPP14923 745 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 LAP3P28838 519 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 TIA1P31483 386 aaKnown RBP eCLIP4.83□□□□□ -1.644e-7■■■□□ 15.6
SMG1-211ENST00000565324 GABRA5P31644 462 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PCGF2P35227 344 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 NAA10P41227 235 aaPredicted RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 GIPRP48546 466 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 CATSPERGQ6ZRH7 1159 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SERINC5Q86VE9 423 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ZNF100Q8IYN0 542 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 LPPQ93052 612 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 TGIF2Q9GZN2 237 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 OPA3Q9H6K4 179 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 GPR83Q9NYM4 423 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 RNF11Q9Y3C5 154 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 RTCAO00442 366 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 ARHGAP33O14559 1287 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 AGPAT2O15120 278 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 FKTNO75072 461 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 C6orf47O95873 294 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 UBL4AP11441 157 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 KDELR2P33947 212 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 FASLGP48023 281 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 CASP6P55212 293 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 KCNJ8Q15842 424 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ARHGAP40Q5TG30 622 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PLPP4Q5VZY2 271 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 BRICD5Q6PL45 260 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms