RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ABCG2Q9UNQ0 655 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 A0A096LPI6 279 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 SCDO00767 359 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 CBR3O75828 277 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 TRAPPC6AO75865 159 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 PDE9AO76083 593 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 WISP1O95388 367 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 OR12D1P0DN82 309 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 GNLYP22749 145 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 GDF1P27539 372 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 EVI2BP34910 448 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 CRATP43155 626 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 MAGEA8P43361 318 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 MAPRE2Q15555 327 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 EXOSC6Q5RKV6 272 aaKnown RBP14.62□□□□□ -0.07
RAB40C-208ENST00000564703 DCST2Q5T1A1 773 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 TIGD3Q6B0B8 471 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 GALNT10Q86SR1 603 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 RNF130Q86XS8 419 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 TMEM251Q8N6I4 163 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 ZNF527Q8NB42 609 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 OR52N2Q8NGI0 321 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 PRR7Q8TB68 274 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 RAB8BQ92930 207 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 GNRHR2Q96P88 292 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 ZNF385DQ9H6B1 395 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 TPT1P8Q9HAU6 139 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 GALNT9Q9HCQ5 603 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 SAR1AQ9NR31 198 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 QPCTLQ9NXS2 382 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 PPP4R1LQ9P1A2 415 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 PCDHB14Q9Y5E9 798 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 WIF1Q9Y5W5 379 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 KCNE3Q9Y6H6 103 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 NBASA2RRP1 2371 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 ESPL1Q14674 2120 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 ZGRF1Q86YA3 2104 aa14.62□□□□□ -0.07
RAB40C-208ENST00000564703 SHANK1Q9Y566 2161 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 TMEM247A6NEH6 219 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 H3BNH8 94 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 PYCARD-AS1I3L0S3 204 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 CLIC1O00299 241 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 SCO2O43819 266 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 FADS1O60427 444 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 STX11O75558 287 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 GLSO94925 669 aaPredicted RBP14.61□□□□□ -0.07
RAB40C-208ENST00000564703 IGKV1D-16P01601 117 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 CAPN3P20807 821 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 TBXA2RP21731 343 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 MAGEA5P43359 124 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 CASP6P55212 293 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 HPCAP84074 193 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 KCNC4Q03721 635 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 C17orf67Q0P5P2 114 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 ARHGAP11BQ3KRB8 267 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 MMEL1Q495T6 779 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 FLYWCH1Q4VC44 716 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 MARCH3Q86UD3 253 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 PLCZ1Q86YW0 608 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 SIAH3Q8IW03 269 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 OR4C3Q8NH37 302 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 PNPT1Q8TCS8 783 aaKnown RBP14.61□□□□□ -0.07
RAB40C-208ENST00000564703 ZFP90Q8TF47 636 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 C10orf82Q8WW14 230 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 SDF2Q99470 211 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 PAIP1Q9H074 479 aaKnown RBP14.61□□□□□ -0.07
RAB40C-208ENST00000564703 THUMPD1Q9NXG2 353 aaKnown RBP14.61□□□□□ -0.07
RAB40C-208ENST00000564703 LIPT1Q9Y234 373 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 EXPH5Q8NEV8 1989 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 CFAP46Q8IYW2 2715 aa14.61□□□□□ -0.07
RAB40C-208ENST00000564703 EVPLLA8MZ36 301 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 NDUFB5O43674 189 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 NGFRP08138 427 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 DRD4P21917 467 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 PPIBP23284 216 aaKnown RBP14.6□□□□□ -0.07
RAB40C-208ENST00000564703 GCKP35557 465 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 PTGDSP41222 190 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 TDGF1P3P51864 188 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 KLF10Q13118 480 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 MRPL49Q13405 166 aaKnown RBP14.6□□□□□ -0.07
RAB40C-208ENST00000564703 GPR68Q15743 365 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.6□□□□□ -0.07
RAB40C-208ENST00000564703 EIF2S3LQ2VIR3 472 aaKnown RBP14.6□□□□□ -0.07
RAB40C-208ENST00000564703 GRAMD1BQ3KR37 738 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 GPAT3Q53EU6 434 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 CMPK2Q5EBM0 449 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 ARHGAP11AQ6P4F7 1023 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 CHDHQ8NE62 594 aaPredicted RBP14.6□□□□□ -0.07
RAB40C-208ENST00000564703 OR4K17Q8NGC6 315 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 DUSP19Q8WTR2 217 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 PTGES2Q9H7Z7 377 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 ZDHHC11Q9H8X9 412 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 SLC52A3Q9NQ40 469 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 FBXO34Q9NWN3 711 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.6□□□□□ -0.07
RAB40C-208ENST00000564703 CAPN7Q9Y6W3 813 aa14.6□□□□□ -0.07
RAB40C-208ENST00000564703 PRRC2CQ9Y520 2896 aaKnown RBP14.6□□□□□ -0.07
RAB40C-208ENST00000564703 LOC100653049A0A140TA62 436 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 GTPBP1O00178 669 aaKnown RBP14.59□□□□□ -0.07
RAB40C-208ENST00000564703 SNPHO15079 494 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms