RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 CLECL1Q8IZS7 167 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 HDDC3Q8N4P3 179 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 GANCQ8TET4 914 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 ATOH1Q92858 354 aaPredicted RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 TMEM203Q969S6 136 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 APIPQ96GX9 242 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 SENP5Q96HI0 755 aaPredicted RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 APOLD1Q96LR9 279 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 H2AFJQ9BTM1 129 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 NLNQ9BYT8 704 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 ABCG5Q9H222 651 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 HPF1Q9NWY4 346 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 ZSCAN32Q9NX65 697 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 ZNF282Q9UDV7 671 aaPredicted RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 SERGEFQ9UGK8 458 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 PFDN2Q9UHV9 154 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 A0A1W2PQF6 199 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 OR6C65A6NJZ3 312 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 MPTX1A8MV57 137 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 EPORP19235 508 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 TNFRSF1BP20333 461 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 ITGALP20701 1170 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 C5AR1P21730 350 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 GALP22466 123 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 AHCYP23526 432 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 POU1F1P28069 291 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 RBMS1P29558 406 aaKnown RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 SSTR2P30874 369 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 CALCRP30988 508 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 ETV5P41161 510 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 RFX3P48380 749 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 CTBP2P56545 445 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 GPR85P60893 370 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 NFATC2Q13469 925 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 MADCAM1Q13477 382 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 OPCMLQ14982 345 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 UBXN2BQ14CS0 331 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 CHRNA6Q15825 494 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 CPSF6Q16630 551 aaKnown RBP eCLIP10.39□□□□□ -0.75
TCF4-222ENST00000564228 CRB2Q5IJ48 1285 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 GCNT6Q5T4J0 391 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 CEACAM20Q6UY09 585 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 C3P1Q6ZMU1 363 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 L3MBTL4Q8NA19 623 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 VPS37AQ8NEZ2 397 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 PCNPQ8WW12 178 aaKnown RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 SCAMP4Q969E2 229 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 MTFMTQ96DP5 389 aaKnown RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 UCN2Q96RP3 112 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 SECISBP2Q96T21 854 aaKnown RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 COPS8Q99627 209 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 NPAS1Q99742 590 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 C7orf50Q9BRJ6 194 aaKnown RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 THAP7Q9BT49 309 aaPredicted RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 DUSP26Q9BV47 211 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 HDAC8Q9BY41 377 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 POLDIP3Q9BY77 421 aaKnown RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 ACTR6Q9GZN1 396 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 SLC32A1Q9H598 525 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 TMEM38AQ9H6F2 299 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 CYSLTR2Q9NS75 346 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 NUDT15Q9NV35 164 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 EXTL2Q9UBQ6 330 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 CRLS1Q9UJA2 301 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 CBLCQ9ULV8 474 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 KCNK7Q9Y2U2 307 aa10.39□□□□□ -0.75
TCF4-222ENST00000564228 EXOSC1Q9Y3B2 195 aaKnown RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 DNMT3AQ9Y6K1 912 aaPredicted RBP10.39□□□□□ -0.75
TCF4-222ENST00000564228 VCANP13611 3396 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 IQCF5A8MTL0 148 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 PRSS44E7EML9 344 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 SCAMP2O15127 329 aaKnown RBP10.38□□□□□ -0.75
TCF4-222ENST00000564228 SLC28A2O43868 658 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 B3GALNT1O75752 331 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 TCRBP04435 133 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 OR1E2P47887 323 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 CRYZQ08257 329 aaKnown RBP10.38□□□□□ -0.75
TCF4-222ENST00000564228 ETFDHQ16134 617 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 EOGTQ5NDL2 527 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 PIP5KL1Q5T9C9 394 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 PTRHD1Q6GMV3 140 aaKnown RBP10.38□□□□□ -0.75
TCF4-222ENST00000564228 TMEM92Q6UXU6 159 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 TMIGD1Q6UXZ0 262 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 WASH2PQ6VEQ5 465 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 SLC30A8Q8IWU4 369 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 CBARPQ8N350 705 aaPredicted RBP10.38□□□□□ -0.75
TCF4-222ENST00000564228 ARIH2OSQ8N7S6 290 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 OR5M3Q8NGP4 307 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 HUS1BQ8NHY5 278 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 FANK1Q8TC84 345 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 MAL2Q969L2 176 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 KCTD12Q96CX2 325 aaKnown RBP10.38□□□□□ -0.75
TCF4-222ENST00000564228 ABCG8Q9H221 673 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 BRD7Q9NPI1 651 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 FAM8A1Q9UBU6 413 aa10.38□□□□□ -0.75
TCF4-222ENST00000564228 ING1Q9UK53 422 aaPredicted RBP10.38□□□□□ -0.75
TCF4-222ENST00000564228 YARS2Q9Y2Z4 477 aaKnown RBP10.38□□□□□ -0.75
TCF4-222ENST00000564228 G3V3Q6 166 aa10.37□□□□□ -0.75
TCF4-222ENST00000564228 J3KTA2 159 aa10.37□□□□□ -0.75
TCF4-222ENST00000564228 AGRPO00253 132 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms