RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 OLR1P78380 273 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 PLOD1Q02809 727 aaPredicted RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 FUT7Q11130 342 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 PIN1Q13526 163 aaPredicted RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 DPYSL3Q14195 570 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 RCAN2Q14206 197 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 RAB35Q15286 201 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 TAF1AQ15573 450 aaPredicted RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 ZSWIM7Q19AV6 140 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 GPR33Q49SQ1 333 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 TEX44Q53QW1 395 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 PIGGQ5H8A4 983 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 NCMAPQ5T1S8 102 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 KPRPQ5T749 579 aaPredicted RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 PRAMEF20Q5VT98 475 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 ATL3Q6DD88 541 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 SBSNQ6UWP8 590 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 STAC2Q6ZMT1 411 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 RINLQ6ZS11 566 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 OVCH2Q7RTZ1 564 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 CREBRFQ8IUR6 639 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 SVOPLQ8N434 492 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 ZNF321PQ8N8H1 164 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 PPHLN1Q8NEY8 458 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 KBTBD8Q8NFY9 601 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 OR13C4Q8NGS5 318 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 TAF15Q92804 592 aaKnown RBP eCLIP3.3□□□□□ -1.88
HERC1-211ENST00000560983 UCN3Q969E3 161 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 SPSB4Q96A44 273 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 RAD51AP1Q96B01 352 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 C3orf49Q96BT1 292 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 NMD3Q96D46 503 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 RBMXL1Q96E39 390 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 OXNAD1Q96HP4 312 aaPredicted RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 ADAD1Q96M93 576 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 JSRP1Q96MG2 331 aaPredicted RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 FOXN4Q96NZ1 517 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 KRT12Q99456 494 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 C1QTNF5Q9BXJ0 243 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 RSPO3Q9BXY4 272 aaPredicted RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 ARNT2Q9HBZ2 717 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 ANKHQ9HCJ1 492 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 MRPS30Q9NP92 439 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 ACSS1Q9NUB1 689 aaPredicted RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 PARVAQ9NVD7 372 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 CISD1Q9NZ45 108 aaKnown RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 FETUBQ9UGM5 382 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 PCYOX1Q9UHG3 505 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 FAM153AQ9UHL3 310 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 MAN1B1Q9UKM7 699 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 CFAP45Q9UL16 551 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 RIMKLBQ9ULI2 386 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 BOKQ9UMX3 212 aaPredicted RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 SLC22A7Q9Y694 548 aa3.3□□□□□ -1.88
HERC1-211ENST00000560983 CHCHD2Q9Y6H1 151 aaPredicted RBP3.3□□□□□ -1.88
HERC1-211ENST00000560983 HUWE1Q7Z6Z7 4374 aaKnown RBP3.29□□□□□ -1.88
HERC1-211ENST00000560983 YLPM1P49750 1951 aaKnown RBP3.29□□□□□ -1.88
HERC1-211ENST00000560983 COL7A1Q02388 2944 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 LOC102723971A0A1B0GUV8 181 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 BICDL2A1A5D9 508 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 DPRXA6NFQ7 191 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 C5orf60A6NFR6 353 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 SHISA9B4DS77 424 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 G3V4G9 280 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 EMC8O43402 210 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 FRS3O43559 492 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 HCRTR2O43614 444 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 RRP9O43818 475 aaKnown RBP3.29□□□□□ -1.88
HERC1-211ENST00000560983 KIF5CO60282 957 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 LCMT2O60294 686 aaKnown RBP3.29□□□□□ -1.88
HERC1-211ENST00000560983 OR1I1O60431 355 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 GALR3O60755 368 aaPredicted RBP3.29□□□□□ -1.88
HERC1-211ENST00000560983 LRATO95237 230 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 ACTL6AO96019 429 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 AGTP01019 485 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 RPN2P04844 631 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 CSF3P09919 207 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 ERGP11308 486 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 DESP17661 470 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 JAK1P23458 1154 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 CHMP24386 653 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 PTPN3P26045 913 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 PRKAR1BP31321 381 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 ZNF140P52738 457 aaPredicted RBP3.29□□□□□ -1.88
HERC1-211ENST00000560983 EFNA4P52798 201 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 SLC25A11Q02978 314 aaKnown RBP3.29□□□□□ -1.88
HERC1-211ENST00000560983 SRYQ05066 204 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 HSPA14Q0VDF9 509 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 STIM1Q13586 685 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 NAA25Q14CX7 972 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 GUSBP1Q15486 140 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 MPEG1Q2M385 716 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 AGAP6Q5VW22 663 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 OPN5Q6U736 354 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 NPNTQ6UXI9 565 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 HSDL2Q6YN16 418 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 ZNF793Q6ZN11 406 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 KCTD20Q7Z5Y7 419 aa3.29□□□□□ -1.88
HERC1-211ENST00000560983 LDB1Q86U70 411 aaPredicted RBP3.29□□□□□ -1.88
HERC1-211ENST00000560983 ANKRD13BQ86YJ7 626 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms