RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
SMAD3-208ENST00000558827 MED12LQ86YW9 2145 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 NPIPA5A0A0B4J1W7 369 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 A0A1W2PRB8 838 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 HSPB2A8KAH6 182 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 NPIPA7E9PJI5 369 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 H0YC42 278 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 SCAMP2O15127 329 aaKnown RBP11.35□□□□□ -0.59
SMAD3-208ENST00000558827 EMC8O43402 210 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 IL33O95760 270 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 C6orf47O95873 294 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 OPN1LWP04000 364 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 NPIPA8P0DM63 369 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 SRD5A2P31213 254 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 CEACAM8P31997 349 aaPredicted RBP11.35□□□□□ -0.59
SMAD3-208ENST00000558827 GCKP35557 465 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 HPCAL1P37235 193 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 ASMTP46597 345 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 TPD52P55327 224 aaPredicted RBP11.35□□□□□ -0.59
SMAD3-208ENST00000558827 PDE7AQ13946 482 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 RCAN2Q14206 197 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 HSPB2Q16082 182 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 DUSP5Q16690 384 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 PGS1Q32NB8 556 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 XKR7Q5GH72 579 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 NHSL2Q5HYW2 709 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 NSUN5P2Q63ZY6 315 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 LACC1Q8IV20 430 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 GCNT2Q8N0V5 402 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 CLEC4FQ8N1N0 589 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 SLC16A11Q8NCK7 471 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 OR6Y1Q8NGX8 325 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 CEP70Q8NHQ1 597 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 MGARPQ8TDB4 240 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 INTS12Q96CB8 462 aaKnown RBP11.35□□□□□ -0.59
SMAD3-208ENST00000558827 GIMAP5Q96F15 307 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 METTL2AQ96IZ6 378 aaKnown RBP11.35□□□□□ -0.59
SMAD3-208ENST00000558827 ZNF559Q9BR84 538 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 C3orf14Q9HBI5 128 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 SIRT3Q9NTG7 399 aaPredicted RBP11.35□□□□□ -0.59
SMAD3-208ENST00000558827 PNPOQ9NVS9 261 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 GIN1Q9NXP7 522 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 ATP6V1HQ9UI12 483 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 RAB21Q9UL25 225 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 TMED5Q9Y3A6 229 aa11.35□□□□□ -0.59
SMAD3-208ENST00000558827 CLCA1A8K7I4 914 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 TMEM114B3SHH9 223 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 EEF1E1-BLOC1S5C9J1V9 151 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 CFLARO15519 480 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 SEC14L5O43304 696 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 EEF1E1O43324 174 aaKnown RBP11.34□□□□□ -0.59
SMAD3-208ENST00000558827 KCNH1O95259 989 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 ACTL6AO96019 429 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 SERPINE1P05121 402 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 G6PDP11413 515 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 IGFBP2P18065 325 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 MAPK1P28482 360 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 LHX2P50458 406 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 CASP9P55211 416 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 GFRA1P56159 465 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 B3GALT5-AS1P59052 145 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 ABCE1P61221 599 aaKnown RBP11.34□□□□□ -0.59
SMAD3-208ENST00000558827 LASP1Q14847 261 aaKnown RBP11.34□□□□□ -0.59
SMAD3-208ENST00000558827 SLC25A35Q3KQZ1 300 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 SPDYE7PQ495Y7 208 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 CPTPQ5TA50 214 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 RAET1LQ5VY80 246 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 POMZP3Q6PJE2 187 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 ENPP6Q6UWR7 440 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 ARSKQ6UWY0 536 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 R3HCC1LQ7Z5L2 792 aaKnown RBP11.34□□□□□ -0.59
SMAD3-208ENST00000558827 TMEM200AQ86VY9 491 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 ACBD4Q8NC06 268 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 OR4C3Q8NH37 302 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 OR5AK3PQ8NH89 298 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 FAM120BQ96EK7 910 aaKnown RBP11.34□□□□□ -0.59
SMAD3-208ENST00000558827 SH3YL1Q96HL8 342 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-208ENST00000558827 KLHDC3Q9BQ90 382 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 G6PC3Q9BUM1 346 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 TBL1XR1Q9BZK7 514 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 CXorf36Q9H7Y0 433 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 ZCCHC3Q9NUD5 404 aaKnown RBP11.34□□□□□ -0.59
SMAD3-208ENST00000558827 KCNE3Q9Y6H6 103 aa11.34□□□□□ -0.59
SMAD3-208ENST00000558827 ANKRD17O75179 2603 aaKnown RBP11.33□□□□□ -0.6
SMAD3-208ENST00000558827 H3BML4 177 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 DVL2O14641 736 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 TBX19O60806 448 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 SLITRK5O94991 958 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 KCNK2O95069 426 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 NKX2-2O95096 273 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 ANGPTL1O95841 491 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 TGM6O95932 706 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 ALOX5P09917 674 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 TMIGD3P0DMS9 266 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-208ENST00000558827 SOAT1P35610 550 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 TIMP3P35625 211 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 FRKP42685 505 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-208ENST00000558827 SLC1A6P48664 564 aa11.33□□□□□ -0.6
SMAD3-208ENST00000558827 CLK3P49761 638 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms