RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ADNPQ9H2P0 1102 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 NT5DC2Q9H857 520 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 WDR54Q9H977 334 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 ANKRA2Q9H9E1 313 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 SAP30LQ9HAJ7 183 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 ANKHQ9HCJ1 492 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 MKKSQ9NPJ1 570 aaPredicted RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 PNO1Q9NRX1 252 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 NSMCE4AQ9NXX6 385 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 STMN3Q9NZ72 180 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 NUDT4Q9NZJ9 180 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 C5AR2Q9P296 337 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 SLC17A7Q9P2U7 560 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 COPG2Q9UBF2 871 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 MTRF1LQ9UGC7 380 aaKnown RBP3.93□□□□□ -1.78
SPG11-211ENST00000558561 PCTPQ9UKL6 214 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 CDC14AQ9UNH5 594 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 ATG4BQ9Y4P1 393 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 ASB4Q9Y574 426 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 PTGDR2Q9Y5Y4 395 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 SLC22A7Q9Y694 548 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 HIVEP3Q5T1R4 2406 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 COL12A1Q99715 3063 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 MYO18BQ8IUG5 2567 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 DNAJC13O75165 2243 aa3.93□□□□□ -1.78
SPG11-211ENST00000558561 IGKV3D-11A0A0A0MRZ8 115 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 NSG1A0A0A6YYJ2 146 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 PINLYPA6NC86 204 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 ANKDD1BA6NHY2 528 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 J3KTA2 159 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 KIF2AO00139 706 aaPredicted RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 PCDH17O14917 1159 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 DHHO43323 396 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 FGF17O60258 216 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 SUPT7LO94864 414 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 CBX6O95503 412 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 HPP00738 406 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 TUBB4AP04350 444 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 KLK1P06870 262 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 HRH2P25021 359 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 PHBP35232 272 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 RFC3P40938 356 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 SERPINB8P50452 374 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 ALDH18A1P54886 795 aaKnown RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 RAE1P78406 368 aaKnown RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 HMGCS1Q01581 520 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 ACTN3Q08043 901 aaPredicted RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 GALNT1Q10472 559 aaPredicted RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 ABRAXAS2Q15018 415 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 NDUFA9Q16795 377 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 FAM83EQ2M2I3 478 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 BTBD16Q32M84 506 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 AWAT1Q58HT5 328 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 ZNF678Q5SXM1 525 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 OR4C11Q6IEV9 310 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 H3F3CQ6NXT2 135 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 PGBD2Q6P3X8 592 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 CYB5D1Q6P9G0 228 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 PAPD4Q6PIY7 484 aaKnown RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 IGFL2Q6UWQ7 119 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 ZNF788Q6ZQV5 615 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 Q6ZS92 163 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 NCCRP1Q6ZVX7 275 aaPredicted RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 MDGA2Q7Z553 956 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 MYLK4Q86YV6 388 aaPredicted RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 BEST3Q8N1M1 668 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 L3MBTL4Q8NA19 623 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 PNLDC1Q8NA58 520 aaKnown RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 TRPV3Q8NET8 790 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 OR2L5Q8NG80 312 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 GABPB2Q8TAK5 448 aaPredicted RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 ELP5Q8TE02 316 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 AENQ8WTP8 325 aaKnown RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 NTN5Q8WTR8 489 aaPredicted RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 PTPMT1Q8WUK0 201 aaPredicted RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 UBTD2Q8WUN7 234 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 CNDP1Q96KN2 507 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 FER1L6-AS2Q96M78 137 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 TMEM237Q96Q45 408 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 PRPF18Q99633 342 aaKnown RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 ARPC5LQ9BPX5 153 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 MECRQ9BV79 373 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 MRPL1Q9BYD6 325 aaKnown RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 C20orf27Q9GZN8 174 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 LHPPQ9H008 270 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 ACTR8Q9H981 624 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 RRAGDQ9NQL2 400 aaPredicted RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 PRTFDC1Q9NRG1 225 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 TEX10Q9NXF1 929 aaPredicted RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 OPTCQ9UBM4 332 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 HEY2Q9UBP5 337 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 GIMAP2Q9UG22 337 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 DAPP1Q9UN19 280 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 EXO1Q9UQ84 846 aaKnown RBP3.92□□□□□ -1.78
SPG11-211ENST00000558561 PADI2Q9Y2J8 665 aa3.92□□□□□ -1.78
SPG11-211ENST00000558561 A0A0G2JMM0 328 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 A0A1W2PPB8 328 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 A0A1W2PRS3 328 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 WDR91A4D1P6 747 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 KIR3DP1A8MWS1 328 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms