RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 HRASLS5Q96KN8 279 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 C7orf34Q96L11 122 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 ZNF607Q96SK3 696 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 NRTNQ99748 197 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 PIP5K1AQ99755 562 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 MAPKAP1Q9BPZ7 522 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 DPH2Q9BQC3 489 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 SPATA5L1Q9BVQ7 753 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 TRIM45Q9H8W5 580 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 ANKHQ9HCJ1 492 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 NECTIN3Q9NQS3 549 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 SEMA3GQ9NS98 782 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 VNN3Q9NY84 501 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 P2RX2Q9UBL9 471 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 ENPP5Q9UJA9 477 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 UTS2RQ9UKP6 389 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 PSME2Q9UL46 239 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 PLAGL1Q9UM63 463 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 CDC14AQ9UNH5 594 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 EXO1Q9UQ84 846 aaKnown RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 SH2B3Q9UQQ2 575 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 MAGED1Q9Y5V3 778 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-216ENST00000554975 LYVE1Q9Y5Y7 322 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 ENPP4Q9Y6X5 453 aa10.36□□□□□ -0.75
SHMT2-216ENST00000554975 SLC9B1P1A6NJY1 282 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 C2orf74A8MZ97 194 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 BTN3A3O00478 584 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 GABARAPO95166 117 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 ZBTB11O95625 1053 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-216ENST00000554975 STSP08842 583 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 EFNA1P20827 205 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-216ENST00000554975 CMPK1P30085 196 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 OTX2P32243 289 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 PTGER4P35408 488 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 AHRP35869 848 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 KRT20P35900 424 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 SSR2P43308 183 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 YAP1P46937 504 aaKnown RBP10.35□□□□□ -0.75
SHMT2-216ENST00000554975 MVDP53602 400 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 RRADP55042 308 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 MANFP55145 182 aaKnown RBP10.35□□□□□ -0.75
SHMT2-216ENST00000554975 FOXL2P58012 376 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 SLC35A2P78381 396 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 HSD11B2P80365 405 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.35□□□□□ -0.75
SHMT2-216ENST00000554975 NPRL3Q12980 569 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 NDUFA9Q16795 377 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 MEP1AQ16819 746 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 CTU2Q2VPK5 515 aaKnown RBP10.35□□□□□ -0.75
SHMT2-216ENST00000554975 PRAMEF8Q5VWM4 474 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 PRAMEF7Q5VXH5 474 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 GTF2IRD2BQ6EKJ0 949 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 XAF1Q6GPH4 301 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 SPNS3Q6ZMD2 512 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 VN1R5Q7Z5H4 357 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 MRGPREQ86SM8 312 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 GTF2IRD2Q86UP8 949 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 RNF130Q86XS8 419 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 KMT5CQ86Y97 462 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 ANKRD13BQ86YJ7 626 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 LGI4Q8N135 537 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 GALNT16Q8N428 558 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 PSMA8Q8TAA3 256 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 PHF10Q8WUB8 498 aaKnown RBP10.35□□□□□ -0.75
SHMT2-216ENST00000554975 PROX1Q92786 737 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 MYDGFQ969H8 173 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 PPP1R14BQ96C90 147 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 SLC35G5Q96KT7 338 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 LRFN5Q96NI6 719 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 IL17FQ96PD4 163 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 ROGDIQ9GZN7 287 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 KLHL25Q9H0H3 589 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 DUSP21Q9H596 190 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 DDX31Q9H8H2 851 aaKnown RBP10.35□□□□□ -0.75
SHMT2-216ENST00000554975 C1GALT1Q9NS00 363 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 PLCXD1Q9NUJ7 323 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 TMEM184CQ9NVA4 438 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 LYARQ9NX58 379 aaKnown RBP10.35□□□□□ -0.75
SHMT2-216ENST00000554975 TAS2R7Q9NYW3 318 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 POMT2Q9UKY4 750 aa10.35□□□□□ -0.75
SHMT2-216ENST00000554975 ISM1B1AKI9 464 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 SH3BGRLO75368 114 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 SERPINB7O75635 380 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 CCNB2O95067 398 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 ADAP00813 363 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 KLK3P07288 261 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-216ENST00000554975 EDN3P14138 238 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 PVRP15151 417 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 BSGP35613 385 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 GGT2P36268 569 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 STXBP1P61764 594 aaKnown RBP10.34□□□□□ -0.75
SHMT2-216ENST00000554975 OCA2Q04671 838 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 EEF1A2Q05639 463 aaKnown RBP10.34□□□□□ -0.75
SHMT2-216ENST00000554975 PRDX1Q06830 199 aaKnown RBP10.34□□□□□ -0.75
SHMT2-216ENST00000554975 NCF4Q15080 339 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 TBCEQ15813 527 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-216ENST00000554975 SLC5A12Q1EHB4 618 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 MICAQ29983 383 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 IQCCQ4KMZ1 466 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 MLIPQ5VWP3 458 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms