RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 OPN1SWP03999 348 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 CBLP22681 906 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 CDC42P60953 191 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 TOR1AIP1Q5JTV8 583 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 COLEC12Q5KU26 742 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 C1orf189Q5VU69 101 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 FAM199XQ6PEV8 388 aaPredicted RBP16.19■□□□□ 0.18
SHOX-204ENST00000554971 CCDC81Q6ZN84 652 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 TBC1D19Q8N5T2 526 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 METTL27Q8N6F8 245 aaPredicted RBP16.19■□□□□ 0.18
SHOX-204ENST00000554971 ZCCHC10Q8TBK6 192 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 DACH2Q96NX9 599 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 NDC1Q9BTX1 674 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 CXorf36Q9H7Y0 433 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 DDX31Q9H8H2 851 aaKnown RBP16.19■□□□□ 0.18
SHOX-204ENST00000554971 SLC22A11Q9NSA0 550 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 CNOT2Q9NZN8 540 aaKnown RBP16.19■□□□□ 0.18
SHOX-204ENST00000554971 SPENQ96T58 3664 aaKnown RBP16.19■□□□□ 0.18
SHOX-204ENST00000554971 hCG_2014768A0A024R1R8 64 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 TMEM247A6NEH6 219 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 PRAMEF25A6NGN4 478 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 MEN1O00255 615 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 CD36P16671 472 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 OPRL1P41146 370 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 ALDH9A1P49189 494 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 MLLT10P55197 1068 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 PRSS53Q2L4Q9 553 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 TMEM35AQ53FP2 167 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 ADCK1Q86TW2 530 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 TMCO5AQ8N6Q1 288 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.19■□□□□ 0.18
SHOX-204ENST00000554971 MS4A6EQ96DS6 147 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 CLIP3Q96DZ5 547 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 LRFN5Q96NI6 719 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 ZNF607Q96SK3 696 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 IMPAD1Q9NX62 359 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 SRPK3Q9UPE1 567 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 A0A1B0GX78 115 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 EFCAB10A6NFE3 127 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 ADAP00813 363 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 TFPTP0C1Z6 253 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 OCM2P0CE71 109 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 OCMP0CE72 109 aaPredicted RBP16.18■□□□□ 0.18
SHOX-204ENST00000554971 SMIM10L1P0DMW3 83 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 ALAS2P22557 587 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 CD82P27701 267 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 OR1E2P47887 323 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 FAM53BQ14153 422 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 MANEAQ5SRI9 462 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 GARNL3Q5VVW2 1013 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 UNQ6494/PRO21346Q6UXR6 183 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 OR6Q1Q8NGQ2 317 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 UTP15Q8TED0 518 aaKnown RBP16.18■□□□□ 0.18
SHOX-204ENST00000554971 APOBEC4Q8WW27 367 aaKnown RBP16.18■□□□□ 0.18
SHOX-204ENST00000554971 PROX1Q92786 737 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 GGHQ92820 318 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 FGF11Q92914 225 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 NKD1Q969G9 470 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 UBE2FQ969M7 185 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 SMIM10Q96HG1 83 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 PIEZO2Q9H5I5 2752 aa16.18■□□□□ 0.18
SHOX-204ENST00000554971 DSCR3O14972 297 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 SERPINB7O75635 380 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 NADKO95544 446 aaPredicted RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 ZNF888P0CJ79 500 aaPredicted RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 TGFBR2P37173 567 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 OR1D4P47884 311 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 ANXA11P50995 505 aaKnown RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 RGS1Q08116 209 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 FAM214AQ32MH5 1076 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 YOD1Q5VVQ6 348 aaPredicted RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 UBE3DQ7Z6J8 389 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 IGFN1Q86VF2 1251 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 TMEM151BQ8IW70 566 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 SLC44A2Q8IWA5 706 aaPredicted RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 CENPSQ8N2Z9 138 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 OR5AK3PQ8NH89 298 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 SLC38A5Q8WUX1 472 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 DHRS1Q96LJ7 313 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 ALPK1Q96QP1 1244 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 F2RL3Q96RI0 385 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 CCDC86Q9H6F5 360 aaKnown RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 LHX9Q9NQ69 397 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 ZNF226Q9NYT6 803 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 AASSQ9UDR5 926 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 OSGIN1Q9UJX0 560 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 TMCC3Q9ULS5 477 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 MGAT4BQ9UQ53 548 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 SH3GLB1Q9Y371 365 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 CORINQ9Y5Q5 1042 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 SNX8Q9Y5X2 465 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 SLC22A7Q9Y694 548 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 A0A0A6YYC8 382 aaPredicted RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 ZAR1LA6NP61 321 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 EFCAB9A8MZ26 197 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 I3L1I5 382 aaPredicted RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 DNAJB6O75190 326 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 MFN2O95140 757 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 RAB8AP61006 207 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 DGCR6Q14129 220 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms