RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FAM120CQ9NX05 1096 aaKnown RBP12.26□□□□□ -0.45
NUP188-211ENST00000550219 QPCTLQ9NXS2 382 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.26□□□□□ -0.45
NUP188-211ENST00000550219 CAMK2AQ9UQM7 478 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 SLC6A5Q9Y345 797 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 L3MBTL1Q9Y468 752 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 NPFFR2Q9Y5X5 522 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 ZNF780BQ9Y6R6 833 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 DCHS2Q6V1P9 2916 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 PRSS51A0A1B0GVH4 220 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 A0A1W2PP18 115 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 KDM4EB2RXH2 506 aaPredicted RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 RNASET2O00584 256 aaKnown RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 GNB5O14775 395 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 CFLARO15519 480 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 PDPK1O15530 556 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 TRIM3O75382 744 aaPredicted RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 ERAL1O75616 437 aaKnown RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 ATP1B1P05026 303 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 CPMP14384 443 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 PORP16435 677 aaPredicted RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 CSNK2A2P19784 350 aaPredicted RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 BMP5P22003 454 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 PRDX6P30041 224 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 DLX5P56178 289 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 DUSP2Q05923 314 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 KRT72Q14CN4 511 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 MAPRE2Q15555 327 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 ACSF3Q4G176 576 aaPredicted RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 ANXA8L1Q5VT79 327 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 OR4F3Q6IEY1 312 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 ARSKQ6UWY0 536 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 VWA5B2Q8N398 1253 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 RELL2Q8NC24 303 aaPredicted RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 RP9Q8TA86 221 aaKnown RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 CIDECQ96AQ7 238 aaPredicted RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 ERP27Q96DN0 273 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 SPDL1Q96EA4 605 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 ZBED6CLQ96FA7 236 aaPredicted RBP12.25□□□□□ -0.45
NUP188-211ENST00000550219 AMDHD1Q96NU7 426 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 METTL7AQ9H8H3 244 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 SLC24A3Q9HC58 644 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 ACKR4Q9NPB9 350 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 GIMAP4Q9NUV9 329 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 BCAP29Q9UHQ4 241 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 BTNL2Q9UIR0 455 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 DTX4Q9Y2E6 619 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 POLQO75417 2590 aa12.25□□□□□ -0.45
NUP188-211ENST00000550219 CCDC154A6NI56 674 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 HSPB2A8KAH6 182 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 NR5A2O00482 541 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 IFI6P09912 130 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 NTSP30990 170 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 MPIP34949 423 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 SOX18P35713 384 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 FEN1P39748 380 aaKnown RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 CDK9P50750 372 aaKnown RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 RPP38P78345 283 aaKnown RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 GABPB1Q06547 395 aaPredicted RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 CRYZQ08257 329 aaKnown RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 LRRC74AQ0VAA2 488 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 FUT7Q11130 342 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 CYLC2Q14093 348 aaPredicted RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 EXOSC7Q15024 291 aaKnown RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 HSPB2Q16082 182 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 VPS26BQ4G0F5 336 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 TIGD2Q4W5G0 525 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 FAM180BQ6P0A1 224 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 FAM111BQ6SJ93 734 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 C6orf89Q6UWU4 347 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 SPNS3Q6ZMD2 512 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 SEM1Q6ZVN7 128 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 TRPM8Q7Z2W7 1104 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 PACS2Q86VP3 889 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 CCDC116Q8IYX3 515 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 ZNF615Q8N8J6 731 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 NAXEQ8NCW5 288 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 VPS37AQ8NEZ2 397 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 TNIP2Q8NFZ5 429 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 PSMA8Q8TAA3 256 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 OR5P2Q8WZ92 322 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 TP53INP1Q96A56 240 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 VPS33AQ96AX1 596 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 CCDC115Q96NT0 180 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 GNRHR2Q96P88 292 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 OR52E6Q96RD3 313 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 BBS4Q96RK4 519 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 GPATCH1Q9BRR8 931 aaKnown RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 ITPAQ9BY32 194 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 NXF5Q9H1B4 397 aaKnown RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 GLIPR2Q9H4G4 154 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 SERHLQ9NQF3 203 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 DNAJB12Q9NXW2 375 aaKnown RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 C15orf41Q9Y2V0 281 aa12.24□□□□□ -0.45
NUP188-211ENST00000550219 TEP1Q99973 2627 aaKnown RBP12.24□□□□□ -0.45
NUP188-211ENST00000550219 ADGRG4Q8IZF6 3080 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 A0A1W2PRB8 838 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 CCT8L1PA6NM43 557 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 FBP2O00757 339 aa12.23□□□□□ -0.45
NUP188-211ENST00000550219 DVL2O14641 736 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms