RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	SLC22A6	Q4U2R8	563 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	MEDAG	Q5VYS4	303 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	CES3	Q6UWW8	571 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	TMEM184A	Q6ZMB5	413 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	LANCL3	Q6ZV70	420 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	POM121L12	Q8N7R1	296 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	ZNF485	Q8NCK3	441 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	OR2T34	Q8NGX1	318 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	FNDC8	Q8TC99	324 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	PNPT1	Q8TCS8	783 aa	Known RBP	4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	C18orf25	Q96B23	403 aa	Predicted RBP	4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	C9orf85	Q96MD7	179 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	ATOH8	Q96SQ7	321 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	ZBP1	Q9H171	429 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	RHOJ	Q9H4E5	214 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	CUTC	Q9NTM9	273 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710	ELOVL2	Q9NXB9	296 aa		4.27	□□□□□ -1.73
PRKDC-208	ENST00000536710		A0A1B0GU03	582 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710		A0A1W2PPR1	153 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	EFCAB7	A8K855	629 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	XPO1	O14980	1071 aa	Known RBP	4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	TM9SF1	O15321	606 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	RHBDL1	O75783	438 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	TM7SF2	O76062	418 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	UFL1	O94874	794 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	VENTX	O95231	258 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	CGA	P01215	116 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	PIGR	P01833	764 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	UGT2B4	P06133	528 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	ALPI	P09923	528 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	ACVR1B	P36896	505 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	ELK3	P41970	407 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	GNPDA1	P46926	289 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	CSRP3	P50461	194 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	NOVA1	P51513	510 aa	Known RBP	4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	ARHGDIB	P52566	201 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	NTHL1	P78549	312 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	COX10	Q12887	443 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	IL18R1	Q13478	541 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	CAMK4	Q16566	473 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	LGSN	Q5TDP6	509 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	CYS1	Q717R9	158 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	HSD11B1L	Q7Z5J1	315 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	UNC5CL	Q8IV45	518 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	CNIH3	Q8TBE1	160 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	TXN2	Q99757	166 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	TMEM121	Q9BTD3	319 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	RMND5A	Q9H871	391 aa		4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	FAM120C	Q9NX05	1096 aa	Known RBP	4.26	□□□□□ -1.73
PRKDC-208	ENST00000536710	PPIAL4C	A0A0B4J2A2	164 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	GSAP	A4D1B5	854 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	SAP18	O00422	153 aa	Known RBP	4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	TBX19	O60806	448 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	KIAA0754	O94854	1291 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	PPIAL4G	P0DN37	164 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	XRCC1	P18887	633 aa	Predicted RBP	4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	PAX7	P23759	505 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	SHC1	P29353	583 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	RPL34	P49207	117 aa	Known RBP	4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	ACADVL	P49748	655 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	CNTN2	Q02246	1040 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	BDH1	Q02338	343 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	RGS1	Q08116	209 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	PUDP	Q08623	228 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	PJVK	Q0ZLH3	352 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	LTB4R	Q15722	352 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	ATAD3B	Q5T9A4	648 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	TMEM17	Q86X19	198 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	TBC1D21	Q8IYX1	336 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	MCOLN2	Q8IZK6	566 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	MAPK1IP1L	Q8NDC0	245 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	ALG12	Q9BV10	488 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	MEPE	Q9NQ76	525 aa	Predicted RBP	4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	IMPAD1	Q9NX62	359 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	GALP	Q9UBC7	116 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	CRLS1	Q9UJA2	301 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	DUSP12	Q9UNI6	340 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	OR10H1	Q9Y4A9	318 aa		4.25	□□□□□ -1.73
PRKDC-208	ENST00000536710	ZSCAN5B	A6NJL1	495 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	GPR89A	B7ZAQ6	455 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710		G3V3Y1	287 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	STX7	O15400	261 aa	Known RBP	4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	ZNF253	O75346	499 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	KBTBD11	O94819	623 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	FAM200B	P0CF97	657 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	GPR89B	P0CG08	455 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	ATP5A1	P25705	553 aa	Known RBP	4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	CA8	P35219	290 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	CHI3L1	P36222	383 aa	Predicted RBP	4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	RPL4	P36578	427 aa	Known RBP	4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	PEX6	Q13608	980 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	RABGAP1L	Q5R372	815 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	CELF3	Q5SZQ8	465 aa	Known RBP	4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	OR8G2P	Q6IF36	304 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	KIAA1328	Q86T90	577 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	GTSCR1	Q86UQ5	136 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	BPIFB2	Q8N4F0	458 aa		4.24	□□□□□ -1.73
PRKDC-208	ENST00000536710	DENND6B	Q8NEG7	585 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms