RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ATXN7L3Q14CW9 347 aaPredicted RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 FAM74A3Q4VXF1 159 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 C14orf28Q4W4Y0 310 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 MS4A13Q5J8X5 152 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 C9orf66Q5T8R8 295 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 BLOC1S2Q6QNY1 142 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 STAC2Q6ZMT1 411 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 LANCL3Q6ZV70 420 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 KIAA1328Q86T90 577 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 RNF130Q86XS8 419 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 LRRC43Q8N309 656 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 Q8N377 158 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 EIF1ADQ8N9N8 165 aaKnown RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 OR8J1Q8NGP2 316 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 OR4Q3Q8NH05 313 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 HCAR2Q8TDS4 363 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 TBCKQ8TEA7 893 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 EMG1Q92979 244 aaKnown RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 SLC41A3Q96GZ6 507 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 ELMO2Q96JJ3 720 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 C18orf12Q96KH6 178 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 ATF6BQ99941 703 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 TRIM9Q9C026 710 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 POLR3FQ9H1D9 316 aaPredicted RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 TUBB1Q9H4B7 451 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 RNF41Q9H4P4 317 aaPredicted RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 POLD4Q9HCU8 107 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 MDFICQ9P1T7 246 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 RNF14Q9UBS8 474 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 CYTH4Q9UIA0 394 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 HPCAL4Q9UM19 191 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 MGAT4AQ9UM21 535 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 AUP1Q9Y679 476 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 IKBKGQ9Y6K9 419 aa2.39□□□□□ -2.03
CD44-234ENST00000531873 DDX49Q9Y6V7 483 aaKnown RBP2.39□□□□□ -2.03
CD44-234ENST00000531873 A8MXK9 166 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 BTN3A3O00478 584 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 LINC01565O15544 149 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 RAMP1O60894 148 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 RHOBTB1O94844 696 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 SNX4O95219 450 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 ADCY5O95622 1261 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 POP4O95707 220 aaKnown RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 F10P00742 488 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 MELTFP08582 738 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 HSD17B1P14061 328 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 OXTRP30559 389 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 SPRP35270 261 aaPredicted RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 PLA2G16P53816 162 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 OSTNP61366 133 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 IRX1P78414 480 aaPredicted RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 TNFRSF17Q02223 184 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 ACY1Q03154 408 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 CYLC2Q14093 348 aaPredicted RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 DPYSL3Q14195 570 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 ZIC1Q15915 447 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 TPD52L1Q16890 204 aaPredicted RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 TATDN3Q17R31 274 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 LRRK1Q38SD2 2015 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 LRRC23Q53EV4 343 aaPredicted RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 VWA2Q5GFL6 755 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 FAM120AOSQ5T036 256 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 ATF7IP2Q5U623 682 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 SLX4IPQ5VYV7 408 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 REP15Q6BDI9 236 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 ACSM5Q6NUN0 579 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 ARMCX5Q6P1M9 558 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 EMBQ6PCB8 327 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 TMEM17Q86X19 198 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 ZNF683Q8IZ20 524 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 WDSUB1Q8N9V3 476 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 NPRL2Q8WTW4 380 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 CTNNBL1Q8WYA6 563 aaPredicted RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 PIWIL1Q96J94 861 aaKnown RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 CNDP1Q96KN2 507 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 RIT2Q99578 217 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 OMDQ99983 421 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 SLC30A2Q9BRI3 323 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 FEM1AQ9BSK4 669 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 CHCHD5Q9BSY4 110 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 MCRIP2Q9BUT9 160 aaKnown RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 GON7Q9BXV9 100 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 MAGT1Q9H0U3 335 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 JPT2Q9H910 190 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 SP140LQ9H930 580 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 ELL3Q9HB65 397 aaPredicted RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 APMAPQ9HDC9 416 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 ABCC13Q9NSE7 274 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 MRPL39Q9NYK5 338 aaKnown RBP2.38□□□□□ -2.03
CD44-234ENST00000531873 COX16Q9P0S2 106 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 PIPOXQ9P0Z9 390 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 GALPQ9UBC7 116 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 GNG12Q9UBI6 72 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 MUTYHQ9UIF7 546 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 USP16Q9Y5T5 823 aa2.38□□□□□ -2.03
CD44-234ENST00000531873 TRBV7-9A0A0J9YWB2 115 aa2.37□□□□□ -2.03
CD44-234ENST00000531873 A0A1W2PPR1 153 aa2.37□□□□□ -2.03
CD44-234ENST00000531873 METTL21EPA6NDL7 271 aa2.37□□□□□ -2.03
CD44-234ENST00000531873 C11orf98E9PRG8 122 aa2.37□□□□□ -2.03
CD44-234ENST00000531873 PRRG1O14668 218 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms