RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 UHMK1Q8TAS1 419 aaKnown RBP10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 HSD17B8Q92506 261 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 S100PBPQ96BU1 408 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 C1GALT1C1Q96EU7 318 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 CNRIP1Q96F85 164 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 ZNF681Q96N22 645 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 TNFRSF13CQ96RJ3 184 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 USB1Q9BQ65 265 aaKnown RBP10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 TRAF4Q9BUZ4 470 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 FOLH1BQ9HBA9 442 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 PFDN4Q9NQP4 134 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 TAS2R9Q9NYW1 312 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 MED11Q9P086 117 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 UTS2RQ9UKP6 389 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 SNX12Q9UMY4 172 aa10.24□□□□□ -0.77
TRAPPC9-203ENST00000517667 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 C17orf51A8MQB3 221 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 TP73O15350 636 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 SSX4O60224 188 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 GPRIN2O60269 458 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 SYNGR4O95473 234 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 TUBBP07437 444 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 ZNF17P17021 662 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 TCP1P17987 556 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 ALDH9A1P49189 494 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 TRA2BP62995 288 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 DUSP2Q05923 314 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 LOXL1Q08397 574 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 STX5Q13190 355 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 ACAP2Q15057 778 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 CTU2Q2VPK5 515 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 PGGHGQ32M88 737 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 GTF2IRD2BQ6EKJ0 949 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 KLC3Q6P597 504 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 CLEC2AQ6UVW9 174 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 GTF2IRD2Q86UP8 949 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 WDR75Q8IWA0 830 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 SLC44A2Q8IWA5 706 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 CTAGE3PQ8IX95 158 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 SLC35F6Q8N357 371 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 OR5M1Q8NGP8 315 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 TM4SF18Q96CE8 201 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 NXNL1Q96CM4 212 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 CDK15Q96Q40 435 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 ELOVL6Q9H5J4 265 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 NOL11Q9H8H0 719 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 HHATLQ9HCP6 504 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 NMRK1Q9NWW6 199 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 FAM120CQ9NX05 1096 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 SENP1Q9P0U3 644 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 GDF2Q9UK05 429 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 CLEC4AQ9UMR7 237 aa10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 YLPM1P49750 1951 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-203ENST00000517667 IGHV4-30-2A0A087WSY4 118 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 A0A096LNT2 108 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 OR7A17O14581 309 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 EIF3HO15372 352 aaKnown RBP eCLIP10.22□□□□□ -0.777e-7■■■□□ 18.3
TRAPPC9-203ENST00000517667 FADS1O60427 444 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 NDUFS7O75251 213 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 SLU7O95391 586 aaKnown RBP10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 GSTA2P09210 222 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 PABPC4LP0CB38 370 aaKnown RBP10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 SLC25A16P16260 332 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 IL32P24001 234 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 ADH6P28332 368 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 AGTR1P30556 359 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 SLC6A8P48029 635 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 NUDT6P53370 316 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 PSMD4P55036 377 aaKnown RBP10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 BSPH1Q075Z2 132 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 GALNT1Q10472 559 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 DECR1Q16698 335 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 WHAMMP3Q1A5X7 153 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 TMEM44Q2T9K0 475 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 GGTA1PQ4G0N0 100 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 CYP27C1Q4G0S4 372 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 FAM180BQ6P0A1 224 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 FIGNL1Q6PIW4 674 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 SSX8Q7RTT4 187 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 DTX2Q86UW9 622 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 KLHL7Q8IXQ5 586 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 CCDC116Q8IYX3 515 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 CENPLQ8N0S6 344 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 KBTBD8Q8NFY9 601 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 OR10H5Q8NGA6 315 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 OR4N2Q8NGD1 307 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 OR9A2Q8NGT5 310 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 OR10D3Q8NH80 312 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 DUSP19Q8WTR2 217 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 ROBO4Q8WZ75 1007 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 MTBPQ96DY7 904 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 ADAD1Q96M93 576 aaKnown RBP10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 SHCBP1LQ9BZQ2 653 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 TRIM31Q9BZY9 425 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 TRIM2Q9C040 744 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 BRF2Q9HAW0 419 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 GIMAP4Q9NUV9 329 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 XPR1Q9UBH6 696 aa10.22□□□□□ -0.77
TRAPPC9-203ENST00000517667 RNF14Q9UBS8 474 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms