RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 SIX3O95343 332 aaPredicted RBP10.41□□□□□ -0.74
CDK9-205ENST00000498339 PYGBP11216 843 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 PTNP21246 168 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 ALDH18A1P54886 795 aaKnown RBP10.41□□□□□ -0.74
CDK9-205ENST00000498339 CDH11P55287 796 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 VLDLRP98155 873 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 PGGHGQ32M88 737 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 ZNF628Q5EBL2 1059 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 FRG2Q64ET8 278 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 FIGNL1Q6PIW4 674 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 ATG4DQ86TL0 474 aaPredicted RBP10.41□□□□□ -0.74
CDK9-205ENST00000498339 GGNQ86UU5 652 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 CCDC116Q8IYX3 515 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 METTL4Q8N3J2 472 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 L3MBTL4Q8NA19 623 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 OR4N2Q8NGD1 307 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 OR10D3Q8NH80 312 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 KCTD4Q8WVF5 259 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 NXNL1Q96CM4 212 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 C11orf24Q96F05 449 aaPredicted RBP10.41□□□□□ -0.74
CDK9-205ENST00000498339 VSTM2LQ96N03 204 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 FRG2BQ96QU4 278 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 TRAF4Q9BUZ4 470 aaPredicted RBP10.41□□□□□ -0.74
CDK9-205ENST00000498339 ELOVL6Q9H5J4 265 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 MANSC1Q9H8J5 431 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 GIMAP4Q9NUV9 329 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 TMEM160Q9NX00 188 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 PAQR5Q9NXK6 330 aaPredicted RBP10.41□□□□□ -0.74
CDK9-205ENST00000498339 FLRT3Q9NZU0 649 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 WHRNQ9P202 907 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 PPP2R2CQ9Y2T4 447 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 FREM1Q5H8C1 2179 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 MALRD1Q5VYJ5 2156 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 ALPK2Q86TB3 2170 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 TNFSF11O14788 317 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 CXCL13O43927 109 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 OPN1LWP04000 364 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 MTHFD2P13995 350 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 CRABP2P29373 138 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 AGTR1P30556 359 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 C21orf58P58505 322 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 IRF9Q00978 393 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 TAB1Q15750 504 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 STK11Q15831 433 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 TMEM201Q5SNT2 666 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 GRTP1Q5TC63 336 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 CYB5R2Q6BCY4 276 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 KLC3Q6P597 504 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 WDR75Q8IWA0 830 aaKnown RBP10.4□□□□□ -0.74
CDK9-205ENST00000498339 ARIH2OSQ8N7S6 290 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 PPM1NQ8N819 430 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 BANPQ8N9N5 519 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 ZNF675Q8TD23 568 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 DUSP19Q8WTR2 217 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 RNF138Q8WVD3 245 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 HTRA1Q92743 480 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 KISS1RQ969F8 398 aaPredicted RBP10.4□□□□□ -0.74
CDK9-205ENST00000498339 EXOSC8Q96B26 276 aaKnown RBP10.4□□□□□ -0.74
CDK9-205ENST00000498339 MTBPQ96DY7 904 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 CACNG6Q9BXT2 260 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 HDHD5Q9BXW7 423 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 TBL1XR1Q9BZK7 514 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 TMEM185BQ9H7F4 350 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 SAYSD1Q9NPB0 183 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 GLRX2Q9NS18 164 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 FBXO34Q9NWN3 711 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 TAS2R9Q9NYW1 312 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 CISD1Q9NZ45 108 aaKnown RBP10.4□□□□□ -0.74
CDK9-205ENST00000498339 KCNS2Q9ULS6 477 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 ABCG2Q9UNQ0 655 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 ACOT9Q9Y305 439 aa10.4□□□□□ -0.74
CDK9-205ENST00000498339 TNPO3Q9Y5L0 923 aaKnown RBP10.4□□□□□ -0.74
CDK9-205ENST00000498339 CADP27708 2225 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 TCRBV9S1A1TA0A576 114 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 E7ESA3 106 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 OR7A17O14581 309 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 LMX1BO60663 402 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 SLC25A16P16260 332 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 IL11P20809 199 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 HNF1AP20823 631 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 ME2P23368 584 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 ADH6P28332 368 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 DSCR9P59020 149 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 LOXL1Q08397 574 aaPredicted RBP10.39□□□□□ -0.75
CDK9-205ENST00000498339 FAM83EQ2M2I3 478 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 AGAP6Q5VW22 663 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 LIPNQ5VXI9 398 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 GTF2IRD2BQ6EKJ0 949 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.39□□□□□ -0.75
CDK9-205ENST00000498339 GALNT10Q86SR1 603 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 MARCH3Q86UD3 253 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 GTF2IRD2Q86UP8 949 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 CCDC25Q86WR0 208 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 FAM9CQ8IZT9 166 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 SLC35F6Q8N357 371 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 ZNF525Q8N782 197 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 RHEBL1Q8TAI7 183 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 TRPC4APQ8TEL6 797 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 ROBO4Q8WZ75 1007 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 HSD17B8Q92506 261 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms