RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 OR4K3Q96R72 315 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 TMEM138Q9NPI0 162 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 MRPL15Q9P015 296 aaKnown RBP6.46□□□□□ -1.37
VPS13B-205ENST00000493587 RPS6KB2Q9UBS0 482 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 PLEKHB1Q9UF11 243 aaPredicted RBP6.46□□□□□ -1.37
VPS13B-205ENST00000493587 STARD10Q9Y365 291 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 NME7Q9Y5B8 376 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 DENND4AQ7Z401 1863 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 ANKRD36A6QL64 1941 aa6.46□□□□□ -1.37
VPS13B-205ENST00000493587 KANTRA0A1W2PQU2 76 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 HYKKA2RU49 373 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 A6NLC8 198 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 AGAP14A8MT82 685 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM189-UBE2V1I3L0A0 370 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 OR7A17O14581 309 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 TGOLN2O43493 480 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 TGM5O43548 720 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 DPM1O60762 260 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 SNRNP70P08621 437 aaKnown RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 STAG3L1P0CL83 205 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 AVPR2P30518 371 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 AHRP35869 848 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 MAGEA12P43365 314 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 BDKRB1P46663 353 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 STARD6P59095 220 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 RAP2BP61225 183 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 PRR5P85299 388 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 DMP1Q13316 513 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 DYRK1AQ13627 763 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 RCAN2Q14206 197 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 LY6KQ17RY6 165 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 PLA1AQ53H76 456 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 ACTBL2Q562R1 376 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 AKR1C8PQ5T2L2 129 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 KHDRBS2Q5VWX1 349 aaKnown RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 B3GNTL1Q67FW5 361 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 OVOS1Q6IE37 1185 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 TAPT1Q6NXT6 567 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 TMIGD1Q6UXZ0 262 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 RANBP3LQ86VV4 465 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 RNF113BQ8IZP6 322 aaKnown RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 PTGR2Q8N8N7 351 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 NIPA2Q8N8Q9 360 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 OR7G2Q8NG99 324 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 OR1S2Q8NGQ3 325 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 MYLIPQ8WY64 445 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 ISOC2Q96AB3 205 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 MSLNLQ96KJ4 702 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 CLCC1Q96S66 551 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM208Q9BTX3 173 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 GJD2Q9UKL4 321 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 NPFFR2Q9Y5X5 522 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 MYO10Q9HD67 2058 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 UBE2QL1A1L167 161 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 ADAM10O14672 748 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 EREGO14944 169 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 LRRTM2O43300 516 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 SEC14L5O43304 696 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 PRAMEF12O95522 483 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 GLP2RO95838 553 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 SCG5P05408 212 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 SPARCP09486 303 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 FAM157BP0CG42 384 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 GJA4P35212 333 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 FOXA1P55317 472 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 SNTB2Q13425 540 aaKnown RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 MBTPS1Q14703 1052 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 RBBP7Q16576 425 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 SLC25A24Q6NUK1 477 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 NXPE4Q6UWF7 544 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 PCDH19Q8TAB3 1148 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 HMGB4Q8WW32 186 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 L3HYPDHQ96EM0 354 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF583Q96ND8 569 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 SERINC2Q96SA4 455 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 GPR20Q99678 358 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 MGME1Q9BQP7 344 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 C11orf84Q9BUA3 381 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 BCO2Q9BYV7 579 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 PRDM12Q9H4Q4 367 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 PPP1R3EQ9H7J1 279 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 PTGES2Q9H7Z7 377 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 METTL8Q9H825 291 aaKnown RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 TBC1D17Q9HA65 648 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 CACYBPQ9HB71 228 aaKnown RBP6.46□□□□□ -1.38
VPS13B-205ENST00000493587 CLEC2DQ9UHP7 191 aa6.46□□□□□ -1.38
VPS13B-205ENST00000493587 CCDC163A0A0D9SF12 145 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF726A6NNF4 738 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 A8MXE2 369 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 LANCL1O43813 399 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ENDOD1O94919 500 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 HOXC6P09630 235 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 RPS2P15880 293 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GPD1P21695 349 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GABRR2P28476 465 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GGT2P36268 569 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SERPINF1P36955 418 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GPR3P46089 330 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 RPS10P46783 165 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 EVX1P49640 407 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms