RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SLC25A25Q6KCM7 469 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 POGLUT1Q8NBL1 392 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 C16orf78Q8WTQ4 265 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 CLP1Q92989 425 aaKnown RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 AHCYL2Q96HN2 611 aaKnown RBP10.98□□□□□ -0.65
HDAC4-210ENST00000493582 FCRL4Q96PJ5 515 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 FAIM2Q9BWQ8 316 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ARL6Q9H0F7 186 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 MAN2C1Q9NTJ4 1040 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ZDHHC3Q9NYG2 299 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 ACTR10Q9NZ32 417 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 MLXQ9UH92 298 aa10.98□□□□□ -0.65
HDAC4-210ENST00000493582 OTOFQ9HC10 1997 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 CXCL11O14625 94 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 SIGLEC6O43699 453 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 SLC2A10O95528 541 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 SNRPBP14678 240 aaKnown RBP10.97□□□□□ -0.65
HDAC4-210ENST00000493582 S100A11P31949 105 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 SLC11A2P49281 568 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 RAG2P55895 527 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 SCRN3Q0VDG4 424 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 CDKN3Q16667 212 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 HECTD3Q5T447 861 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 AGTRAPQ6RW13 159 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 ARL9Q6T311 187 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 HSD17B13Q7Z5P4 300 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-210ENST00000493582 PDZD9Q8IXQ8 264 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 RELL2Q8NC24 303 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-210ENST00000493582 ZDHHC1Q8WTX9 485 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 ACTR6Q9GZN1 396 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 GPBP1L1Q9HC44 474 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-210ENST00000493582 NPDC1Q9NQX5 325 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-210ENST00000493582 ZNF69Q9UC07 566 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 ERVK-19Q9WJR5 959 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 FAM183AA6NL82 134 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 H7C2Y5 167 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 M0QZ92 97 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 SGTAO43765 313 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 UGDHO60701 494 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 KLHL18O94889 574 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 NFATC1O95644 943 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 IRF1P10914 325 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 MMP15P51511 669 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 MRPS6P82932 125 aaKnown RBP10.97□□□□□ -0.65
HDAC4-210ENST00000493582 MEF2AQ02078 507 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-210ENST00000493582 CAMK1Q14012 370 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 PABPC1L2AQ5JQF8 200 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 C1orf94Q6P1W5 598 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 TMPRSS11BQ86T26 416 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 ZNF280BQ86YH2 543 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 KRT78Q8N1N4 520 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 OR51G2Q8NGK0 314 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 ZFPM2Q8WW38 1151 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 ZNF707Q96C28 371 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-210ENST00000493582 COA4Q9NYJ1 87 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 IL20Q9NYY1 176 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 PIM2Q9P1W9 311 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 MRTO4Q9UKD2 239 aaKnown RBP10.97□□□□□ -0.65
HDAC4-210ENST00000493582 ACAD8Q9UKU7 415 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 CA5BQ9Y2D0 317 aa10.97□□□□□ -0.65
HDAC4-210ENST00000493582 A0A1W2PRQ8 180 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 GLTPD2A6NH11 291 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 NPIPB15A6NHN6 443 aaPredicted RBP10.96□□□□□ -0.65
HDAC4-210ENST00000493582 KDM4EB2RXH2 506 aaPredicted RBP10.96□□□□□ -0.65
HDAC4-210ENST00000493582 ARPC1BO15143 372 aaKnown RBP10.96□□□□□ -0.65
HDAC4-210ENST00000493582 RP2O75695 350 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 IL3P08700 152 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 EPHA4P54764 986 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 AP1S2P56377 157 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 SMIM11AP58511 58 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 PSMA6P60900 246 aaKnown RBP10.96□□□□□ -0.65
HDAC4-210ENST00000493582 SP140Q13342 867 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 KLF9Q13886 244 aaPredicted RBP10.96□□□□□ -0.65
HDAC4-210ENST00000493582 TMEM88Q6PEY1 159 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 CD300LDQ6UXZ3 194 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 TPGS1Q6ZTW0 290 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 CEACAM19Q7Z692 300 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 SIRT6Q8N6T7 355 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 MORN4Q8NDC4 146 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 OR6T1Q8NGN1 323 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 GANCQ8TET4 914 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 NEIL2Q969S2 332 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 BTBD1Q9H0C5 482 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 NANSQ9NR45 359 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 CD84Q9UIB8 345 aa10.96□□□□□ -0.65
HDAC4-210ENST00000493582 PRG3Q9Y2Y8 225 aaPredicted RBP10.96□□□□□ -0.65
HDAC4-210ENST00000493582 A0A0G2JK05 382 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 OR6C75A6NL08 312 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 PGRMC2O15173 223 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 UBL3O95164 117 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 SPDEFO95238 335 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 GABRA1P14867 456 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 XPAP23025 273 aaPredicted RBP10.96□□□□□ -0.66
HDAC4-210ENST00000493582 HSD3B2P26439 372 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 GDNFP39905 211 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 SLC3A1Q07837 685 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 LTB4RQ15722 352 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 SYPL1Q16563 259 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 FAM209BQ5JX69 171 aa10.96□□□□□ -0.66
HDAC4-210ENST00000493582 MPP7Q5T2T1 576 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms