RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 OR4N2Q8NGD1 307 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 NFKBIDQ8NI38 313 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 SLC22A8Q8TCC7 542 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 GRHL3Q8TE85 626 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 PSMF1Q92530 271 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 TP53INP1Q96A56 240 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 REXO5Q96IC2 774 aaKnown RBP12.37□□□□□ -0.43
MSH6-208ENST00000493177 ZNF583Q96ND8 569 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 BTBD2Q9BX70 525 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 GIN1Q9NXP7 522 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 MRTO4Q9UKD2 239 aaKnown RBP12.37□□□□□ -0.43
MSH6-208ENST00000493177 CBLCQ9ULV8 474 aa12.37□□□□□ -0.43
MSH6-208ENST00000493177 ELOVL7A1L3X0 281 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ACOX3O15254 700 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 GMNNO75496 209 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 AK1P00568 194 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ARAFP10398 606 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 BMP2P12643 396 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ATP6V1C1P21283 382 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ME2P23368 584 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 MSX2P35548 267 aaPredicted RBP12.36□□□□□ -0.43
MSH6-208ENST00000493177 MAP3K8P41279 467 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 TNFSF10P50591 281 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 GZMMP51124 257 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 MRPS22P82650 360 aaKnown RBP12.36□□□□□ -0.43
MSH6-208ENST00000493177 CDK6Q00534 326 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 OC90Q02509 493 aaPredicted RBP12.36□□□□□ -0.43
MSH6-208ENST00000493177 RBBP4Q09028 425 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 PLCXD2Q0VAA5 305 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 GNA13Q14344 377 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ESPL1Q14674 2120 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 DECR1Q16698 335 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ZNF630Q2M218 657 aaPredicted RBP12.36□□□□□ -0.43
MSH6-208ENST00000493177 VMACQ2NL98 169 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ARHGAP11BQ3KRB8 267 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 CYP27C1Q4G0S4 372 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 PIGGQ5H8A4 983 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 EXOSC6Q5RKV6 272 aaKnown RBP12.36□□□□□ -0.43
MSH6-208ENST00000493177 ASRGL1Q7L266 308 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 NET1Q7Z628 596 aaPredicted RBP12.36□□□□□ -0.43
MSH6-208ENST00000493177 GALNT10Q86SR1 603 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 RPS19BP1Q86WX3 136 aaKnown RBP12.36□□□□□ -0.43
MSH6-208ENST00000493177 PTOV1Q86YD1 416 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ULK2Q8IYT8 1036 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 MICU2Q8IYU8 434 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 SLC34A3Q8N130 599 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 BEST3Q8N1M1 668 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 FBXW8Q8N3Y1 598 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 BCORP1Q8N888 145 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ZNF441Q8N8Z8 693 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ANKFN1Q8N957 763 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 C17orf47Q8NEP4 570 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 HAS2Q92819 552 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 HOXB13Q92826 284 aaPredicted RBP12.36□□□□□ -0.43
MSH6-208ENST00000493177 TMBIM1Q969X1 311 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 CCDC124Q96CT7 223 aaKnown RBP12.36□□□□□ -0.43
MSH6-208ENST00000493177 HSPBAP1Q96EW2 488 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 TMEM19Q96HH6 336 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 TMEM38AQ9H6F2 299 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 A4GALTQ9NPC4 353 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 OLAHQ9NV23 265 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 MYOTQ9UBF9 498 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 EGFL7Q9UHF1 273 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 LIPT1Q9Y234 373 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 ANGPT4Q9Y264 503 aa12.36□□□□□ -0.43
MSH6-208ENST00000493177 TMEM200CA6NKL6 621 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 REM1O75628 298 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 OR2J2O76002 312 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 KCNK2O95069 426 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 RASAL1O95294 804 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 STAMBPO95630 424 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 TFPTP0C1Z6 253 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 HSD17B1P14061 328 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 IL12BP29460 328 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 PCGF2P35227 344 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 CRISP3P54108 245 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 PSMD4P55036 377 aaKnown RBP12.35□□□□□ -0.43
MSH6-208ENST00000493177 PSPHP78330 225 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 ADRM1Q16186 407 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 SPATS1Q496A3 300 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 RPS26P11Q5JNZ5 115 aaPredicted RBP12.35□□□□□ -0.43
MSH6-208ENST00000493177 ACER2Q5QJU3 275 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 HEPHL1Q6MZM0 1159 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 OLIG3Q7RTU3 272 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 HIPK4Q8NE63 616 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 SLC38A5Q8WUX1 472 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 FAR1Q8WVX9 515 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 FIG4Q92562 907 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 EFHD2Q96C19 240 aaPredicted RBP12.35□□□□□ -0.43
MSH6-208ENST00000493177 OMA1Q96E52 524 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 RAB3IPQ96QF0 476 aaPredicted RBP12.35□□□□□ -0.43
MSH6-208ENST00000493177 UTP23Q9BRU9 249 aaKnown RBP12.35□□□□□ -0.43
MSH6-208ENST00000493177 RNF32Q9H0A6 362 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 MMADHCQ9H3L0 296 aaPredicted RBP12.35□□□□□ -0.43
MSH6-208ENST00000493177 CACYBPQ9HB71 228 aaKnown RBP12.35□□□□□ -0.43
MSH6-208ENST00000493177 ANKRD10Q9NXR5 420 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 CALML5Q9NZT1 146 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 CD300AQ9UGN4 299 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 NTNG1Q9Y2I2 539 aa12.35□□□□□ -0.43
MSH6-208ENST00000493177 CFAP46Q8IYW2 2715 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms