RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 FNDC7Q5VTL7 733 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 TNFAIP8L2Q6P589 184 aaPredicted RBP12.77□□□□□ -0.37
CCM2-217ENST00000492883 C16orf62Q7Z3J2 963 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 RNF130Q86XS8 419 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 OR4C3Q8NH37 302 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 PNPT1Q8TCS8 783 aaKnown RBP12.77□□□□□ -0.37
CCM2-217ENST00000492883 GTF2H4Q92759 462 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 RAB8BQ92930 207 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 FAM107BQ9H098 131 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 SERHL2Q9H4I8 314 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 ZNF703Q9H7S9 590 aaPredicted RBP12.77□□□□□ -0.37
CCM2-217ENST00000492883 ZDHHC11Q9H8X9 412 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 MRGBPQ9NV56 204 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 PPP4R1LQ9P1A2 415 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 ABCG2Q9UNQ0 655 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 WIF1Q9Y5W5 379 aa12.77□□□□□ -0.37
CCM2-217ENST00000492883 A0A1B0GTH9 108 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 A0A1W2PP18 115 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 GMNCA6NCL1 334 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 SCDO00767 359 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 CBR3O75828 277 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 AK1P00568 194 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 CELA3AP09093 270 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 ZCCHC18P0CG32 403 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 ABOP16442 354 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 CAPN3P20807 821 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 LSP1P33241 339 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 STX5Q13190 355 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 OR5M10Q6IEU7 315 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 CPLX4Q7Z7G2 160 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 ZAR1Q86SH2 424 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 MARCH3Q86UD3 253 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 PLCZ1Q86YW0 608 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 SPPL2CQ8IUH8 684 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 WDSUB1Q8N9V3 476 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 ZFP90Q8TF47 636 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 DUSP19Q8WTR2 217 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 NTNG2Q96CW9 530 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 PHF12Q96QT6 1004 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 SDF2Q99470 211 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 ELAC2Q9BQ52 826 aaKnown RBP12.76□□□□□ -0.37
CCM2-217ENST00000492883 HOXD1Q9GZZ0 328 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 NSRP1Q9H0G5 558 aaKnown RBP12.76□□□□□ -0.37
CCM2-217ENST00000492883 ZNF385DQ9H6B1 395 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 TPT1P8Q9HAU6 139 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 UBQLN4Q9NRR5 601 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 SLC6A13Q9NSD5 602 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 QPCTLQ9NXS2 382 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 C15orf41Q9Y2V0 281 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 NDUFAF1Q9Y375 327 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 COL6A6A6NMZ7 2263 aa12.76□□□□□ -0.37
CCM2-217ENST00000492883 A0A096LPI6 279 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 TRGV5A0A0B4J1U4 118 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 ANGPT2O15123 496 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 ZNHIT1O43257 154 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 OXSR1O95747 527 aaPredicted RBP12.75□□□□□ -0.37
CCM2-217ENST00000492883 ANGPTL1O95841 491 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 C1QCP02747 245 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 SNRPB2P08579 225 aaKnown RBP12.75□□□□□ -0.37
CCM2-217ENST00000492883 CD1EP15812 388 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 TBXA2RP21731 343 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 PTPN6P29350 595 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 PTGS2P35354 604 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 CRATP43155 626 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 GAS1P54826 345 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 CASP6P55212 293 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 TXNL4AP83876 142 aaKnown RBP12.75□□□□□ -0.37
CCM2-217ENST00000492883 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.75□□□□□ -0.37
CCM2-217ENST00000492883 ARHGAP11BQ3KRB8 267 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 GTDC1Q4AE62 458 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 FLYWCH1Q4VC44 716 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 PAGE3Q5JUK9 113 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 ARHGAP11AQ6P4F7 1023 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 ZNF527Q8NB42 609 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 CHDHQ8NE62 594 aaPredicted RBP12.75□□□□□ -0.37
CCM2-217ENST00000492883 OR4K17Q8NGC6 315 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 RNF138Q8WVD3 245 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 C10orf82Q8WW14 230 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 DTNBP1Q96EV8 351 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 PAIP1Q9H074 479 aaKnown RBP12.75□□□□□ -0.37
CCM2-217ENST00000492883 ACKR4Q9NPB9 350 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 SLC52A3Q9NQ40 469 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 LEF1Q9UJU2 399 aaPredicted RBP12.75□□□□□ -0.37
CCM2-217ENST00000492883 PCDHB14Q9Y5E9 798 aa12.75□□□□□ -0.37
CCM2-217ENST00000492883 NPIPA5A0A0B4J1W7 369 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 TRGV8A0A0C4DH27 118 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 ALG1L2C9J202 215 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 NPIPA7E9PJI5 369 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 CLIC1O00299 241 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 HMGN4O00479 90 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 NDUFB5O43674 189 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 SLC19A2O60779 497 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 STX11O75558 287 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 IGHG3P01860 377 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 NGFRP08138 427 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 NPIPA8P0DM63 369 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 C17orf67Q0P5P2 114 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 UBAP2LQ14157 1087 aaKnown RBP12.74□□□□□ -0.37
CCM2-217ENST00000492883 GPR68Q15743 365 aa12.74□□□□□ -0.37
CCM2-217ENST00000492883 GPAT3Q53EU6 434 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms