RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 HNRNPFP52597 415 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 TPTEP56180 551 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 STXBP1P61764 594 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 RHAGQ02094 409 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 MAPK11Q15759 364 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 KCNJ8Q15842 424 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 CPSF6Q16630 551 aaKnown RBP eCLIP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 GTDC1Q4AE62 458 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 COLEC12Q5KU26 742 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 KDM4DQ6B0I6 523 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 OR2T5Q6IEZ7 315 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 ABHD17CQ6PCB6 329 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 TUBA3EQ6PEY2 450 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 TMEM205Q6UW68 189 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 LANCL3Q6ZV70 420 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 CFAP46Q8IYW2 2715 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 KRTCAP2Q8N6L1 136 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 OR2L5Q8NG80 312 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 OR2T29Q8NH02 315 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 HUS1BQ8NHY5 278 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 MCFD2Q8NI22 146 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 PSMA8Q8TAA3 256 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 WDR20Q8TBZ3 569 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 FCGR1BQ92637 280 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 NACC2Q96BF6 587 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 ITCHQ96J02 903 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 IP6K3Q96PC2 410 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 CPPED1Q9BRF8 314 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 NTMT1Q9BV86 223 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 REXO4Q9GZR2 422 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 MMP27Q9H306 513 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 IL1RAPQ9NPH3 570 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 SACM1LQ9NTJ5 587 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 IGHV3-20A0A0C4DH32 117 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 URADA6NGE7 173 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 EFCAB9A8MZ26 197 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 H0YIV9 168 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 SAP18O00422 153 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 RTCAO00442 366 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 UPK1BO75841 260 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 ETHE1O95571 254 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 MT-ND2P03891 347 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 COX6A1P12074 109 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 CYP4B1P13584 511 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 PCSK2P16519 638 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 CD36P16671 472 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 S100A1P23297 94 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 DNAJA1P31689 397 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 S100A3P33764 101 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 GSSP48637 474 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 MASP1P48740 699 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 CLK1P49759 484 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 NEK2P51955 445 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 CSNK2BP67870 215 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 BTG2P78543 158 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 EEF1A2Q05639 463 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 DDX39BQ13838 428 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 MINDY4Q4G0A6 757 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 MFSD4BQ5TF39 518 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF793Q6ZN11 406 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 TMEM52Q8NDY8 209 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 C9orf43Q8TAL5 461 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 MTFMTQ96DP5 389 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 FER1L6-AS2Q96M78 137 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 MTERF1Q99551 399 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 SORBS1Q9BX66 1292 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 OR51B5Q9H339 312 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 KIF17Q9P2E2 1029 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 TRPS1Q9UHF7 1281 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 OSGIN1Q9UJX0 560 aa8.76□□□□□ -1.01
BRCA1-219ENST00000491747 NDRG4Q9ULP0 352 aaKnown RBP8.76□□□□□ -1.01
BRCA1-219ENST00000491747 LOC102723996A0A087X1L8 192 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 IGHV1-45A0A0A0MS14 117 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 MAGEB17A8MXT2 336 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 MYO1GB0I1T2 1018 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 MKRN2OSH3BPM6 223 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 UGDHO60701 494 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 CLDN9O95484 217 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 OXSR1O95747 527 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF682O95780 498 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 FHP07954 510 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 CELA2AP08217 269 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ACPPP15309 386 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 FPR1P21462 350 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 CERS1P27544 350 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 CLK3P49761 638 aaKnown RBP8.75□□□□□ -1.01
BRCA1-219ENST00000491747 GZMMP51124 257 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 DAPP51397 102 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 RRADP55042 308 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 RPS13P62277 151 aaKnown RBP8.75□□□□□ -1.01
BRCA1-219ENST00000491747 MAD2L1BPQ15013 274 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-219ENST00000491747 PCOLCEQ15113 449 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF181Q2M3W8 571 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF404Q494X3 552 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 TSLPQ969D9 159 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 TXNDC15Q96J42 360 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ITPAQ9BY32 194 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF160Q9HCG1 818 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 DMRT3Q9NQL9 472 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 FARSBQ9NSD9 589 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms