RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PGAM4Q8N0Y7 254 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 OR2L13Q8N349 312 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 OR2M7Q8NG81 312 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 OR5AK3PQ8NH89 298 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 SFXN5Q8TD22 340 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 ITLN2Q8WWU7 325 aaPredicted RBP9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 UTP4Q969X6 686 aaKnown RBP9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 FAM173AQ9BQD7 235 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 NANOGQ9H9S0 305 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 NEUROD4Q9HD90 331 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 SACM1LQ9NTJ5 587 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 DEPPQ9NTK1 212 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 GIMAP4Q9NUV9 329 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 GID8Q9NWU2 228 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 KLF2Q9Y5W3 355 aaPredicted RBP9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 NAV2Q8IVL1 2488 aa9.71□□□□□ -0.86
SCAMP4-208ENST00000489554 NME6O75414 186 aaPredicted RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 P04436 131 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 AGAP20933 346 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 UQCRC2P22695 453 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 COL8A1P27658 744 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 PTGS2P35354 604 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 GCKP35557 465 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 RFC3P40938 356 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 MAP3K8P41279 467 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 MAN2A2P49641 1150 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 SMSP52788 366 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 MTPNP58546 118 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 PSME3P61289 254 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 PPIAP62937 165 aaKnown RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 HSF1Q00613 529 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 PLGLB1Q02325 96 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 EXOSC7Q15024 291 aaKnown RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 EBPQ15125 230 aaKnown RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNF791Q3KP31 576 aaPredicted RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 CMPK2Q5EBM0 449 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 COX20Q5RI15 118 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 C1orf146Q5VVC0 180 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 ARHGAP11AQ6P4F7 1023 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 XKRXQ6PP77 449 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNF621Q6ZSS3 439 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 MRGPRGQ86SM5 289 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC22A16Q86VW1 577 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 CHERPQ8IWX8 916 aaKnown RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 DEFB107AQ8IZN7 70 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 TAGAPQ8N103 731 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 FBXW8Q8N3Y1 598 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNF615Q8N8J6 731 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 VPS37AQ8NEZ2 397 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 OR8J3Q8NGG0 315 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 ZFP28Q8NHY6 868 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 PHF10Q8WUB8 498 aaKnown RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 HOXB13Q92826 284 aaPredicted RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 SPACA9Q96E40 222 aaPredicted RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 NEURL3Q96EH8 262 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 GAL3ST4Q96RP7 486 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 HOPXQ9BPY8 73 aaPredicted RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC35A5Q9BS91 424 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 WWTR1Q9GZV5 400 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 VCX3BQ9H321 246 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 DENND2DQ9H6A0 471 aaPredicted RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 TMEM181Q9P2C4 612 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 C19orf53Q9UNZ5 99 aaPredicted RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 USP22Q9UPT9 525 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 DTX4Q9Y2E6 619 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 MEMO1Q9Y316 297 aa9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 DIDO1Q9BTC0 2240 aaKnown RBP9.7□□□□□ -0.86
SCAMP4-208ENST00000489554 RNF103-CHMP3A0A140T963 221 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 A0A1B0GTH9 108 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 C2orf92A0A1B0GVN3 265 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 PRSS44E7EML9 344 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 E9PLN8 166 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 CLIC1O00299 241 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 EMC8O43402 210 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 CDC40O60508 579 aaKnown RBP eCLIP9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNF354AO60765 605 aaPredicted RBP9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 GLSO94925 669 aaPredicted RBP9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 SLITRK5O94991 958 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 NADKO95544 446 aaPredicted RBP9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 CCL3P10147 92 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 GPX2P18283 190 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 NT5EP21589 574 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 SSTR4P31391 388 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 CCT3P49368 545 aaKnown RBP9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 EMDP50402 254 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC7A2P52569 658 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 ACTR3P61158 418 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 CEACAM7Q14002 265 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 MAPK11Q15759 364 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 HYAL4Q2M3T9 481 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 HLA-DQA1Q5Y7H0 255 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC22A10Q63ZE4 541 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNF787Q6DD87 383 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 PGM2L1Q6PCE3 622 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 LYPD8Q6UX82 237 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 C6orf120Q7Z4R8 191 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 FGD2Q7Z6J4 655 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 CALHM3Q86XJ0 350 aa9.69□□□□□ -0.86
SCAMP4-208ENST00000489554 DOLPP1Q86YN1 238 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms