RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 WDR75Q8IWA0 830 aaKnown RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 WDSUB1Q8N9V3 476 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 FAM83FQ8NEG4 500 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 PSMA8Q8TAA3 256 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 FBXO30Q8TB52 745 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 PIWIL2Q8TC59 973 aaKnown RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 SFXN5Q8TD22 340 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 ADAMTS15Q8TE58 950 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 HOXB13Q92826 284 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 ABTB1Q969K4 478 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 STACQ99469 402 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 ZBTB18Q99592 522 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 YIPF4Q9BSR8 244 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 G6PC3Q9BUM1 346 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 ACTRT3Q9BYD9 372 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 ACBD3Q9H3P7 528 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 PTGES2Q9H7Z7 377 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 SIRT3Q9NTG7 399 aaPredicted RBP13.02□□□□□ -0.33
BRCA1-218ENST00000489037 SLC6A5Q9Y345 797 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 HRH3Q9Y5N1 445 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 MED12Q93074 2177 aa13.02□□□□□ -0.33
BRCA1-218ENST00000489037 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 GOLGA8QA0A0J9YX86 632 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 GOLGA8OA6NCC3 632 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 GOLGA8NF8WBI6 632 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 RNASET2O00584 256 aaKnown RBP13.01□□□□□ -0.33
BRCA1-218ENST00000489037 SDHDO14521 159 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 FADS1O60427 444 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 UTS2O95399 124 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 ACTL6AO96019 429 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 ACP2P11117 423 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 H2AFXP16104 143 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-218ENST00000489037 ENDOUP21128 410 aaKnown RBP13.01□□□□□ -0.33
BRCA1-218ENST00000489037 ATP6V1C1P21283 382 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 COL8A1P27658 744 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 EPHA3P29320 983 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 SRD5A2P31213 254 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 S100A3P33764 101 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 MAP3K8P41279 467 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 NUP107P57740 925 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 POU6F2P78424 691 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-218ENST00000489037 C17orf67Q0P5P2 114 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 DUSP5Q16690 384 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 HIST2H2BCQ6DN03 193 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 OR5M10Q6IEU7 315 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 CDC73Q6P1J9 531 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 AAGABQ6PD74 315 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 ENPP6Q6UWR7 440 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 NCCRP1Q6ZVX7 275 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-218ENST00000489037 IFNEQ86WN2 208 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 SLC16A11Q8NCK7 471 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 OR8J2Q8NGG1 315 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 OR4A15Q8NGL6 344 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 TESCQ96BS2 214 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 GIMAP5Q96F15 307 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 C16orf58Q96GQ5 468 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 TIMP4Q99727 224 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 BTBD2Q9BX70 525 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 OR2B2Q9GZK3 357 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 PIGUQ9H490 435 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 CXorf36Q9H7Y0 433 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 DUSP22Q9NRW4 184 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 GIN1Q9NXP7 522 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 TAS2R10Q9NYW0 307 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 CAMK2AQ9UQM7 478 aa13.01□□□□□ -0.33
BRCA1-218ENST00000489037 INTS1Q8N201 2190 aaKnown RBP13□□□□□ -0.33
BRCA1-218ENST00000489037 PRSS51A0A1B0GVH4 220 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 DUXAA6NLW8 204 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 KCNK2O95069 426 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 CPSF4O95639 269 aaKnown RBP13□□□□□ -0.33
BRCA1-218ENST00000489037 BMP7P18075 431 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 DPP4P27487 766 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 CHRNB4P30926 498 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 DSCR4P56555 118 aaPredicted RBP13□□□□□ -0.33
BRCA1-218ENST00000489037 HBA1P69905 142 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 CRYZQ08257 329 aaKnown RBP13□□□□□ -0.33
BRCA1-218ENST00000489037 STX5Q13190 355 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 ZNF630Q2M218 657 aaPredicted RBP13□□□□□ -0.33
BRCA1-218ENST00000489037 TTMPQ5BVD1 217 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 NHSL2Q5HYW2 709 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 VASNQ6EMK4 673 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 FIGNL1Q6PIW4 674 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 ULK2Q8IYT8 1036 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 NUDT8Q8WV74 236 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 RNF138Q8WVD3 245 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 SH3GL2Q99962 352 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 TTYH2Q9BSA4 534 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 UGT2B28Q9BY64 529 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 DSN1Q9H410 356 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 WDR55Q9H6Y2 383 aaPredicted RBP13□□□□□ -0.33
BRCA1-218ENST00000489037 AIG1Q9NVV5 245 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 FBXL2Q9UKC9 423 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 RNF6Q9Y252 685 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 MRPS18CQ9Y3D5 142 aaKnown RBP13□□□□□ -0.33
BRCA1-218ENST00000489037 UTP20O75691 2785 aaKnown RBP13□□□□□ -0.33
BRCA1-218ENST00000489037 PKDREJQ9NTG1 2253 aa13□□□□□ -0.33
BRCA1-218ENST00000489037 E9PBE3 544 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 SCDO00767 359 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 NDUFB5O43674 189 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 ANGPTL1O95841 491 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms