RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 BTBD16Q32M84 506 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 ACSBG2Q5FVE4 666 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 CTSL3PQ5NE16 218 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 ARMC3Q5W041 872 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 WBP2NLQ6ICG8 309 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 SLC25A25Q6KCM7 469 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 SUSD1Q6UWL2 747 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 C4orf22Q6V702 233 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 SMIM29Q86T20 159 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 DOLPP1Q86YN1 238 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 SIAH3Q8IW03 269 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 CEP97Q8IW35 865 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 WDR75Q8IWA0 830 aaKnown RBP3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 EID3Q8N140 333 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 BEST3Q8N1M1 668 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 GHDCQ8N2G8 530 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 TMEM178AQ8NBL3 297 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 PLPP5Q8NEB5 264 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 OR51Q1Q8NH59 317 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 LILRB1Q8NHL6 650 aaPredicted RBP3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 LPGAT1Q92604 370 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 SCMH1Q96GD3 660 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 HES6Q96HZ4 224 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 MAGED4Q96JG8 741 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 SIGLEC12Q96PQ1 595 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 TREX2Q9BQ50 279 aaPredicted RBP3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 UTP23Q9BRU9 249 aaKnown RBP3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 KIFC1Q9BW19 673 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 FAM129AQ9BZQ8 928 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 VN1R1Q9GZP7 353 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 IL22Q9GZX6 179 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 TSPY26PQ9H489 355 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 KCNK13Q9HB14 408 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 MCCC2Q9HCC0 563 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 MMP25Q9NPA2 562 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 EIF2B3Q9NR50 452 aaKnown RBP3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 BFARQ9NZS9 450 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 PAK5Q9P286 719 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 KLHL42Q9P2K6 505 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 TAC3Q9UHF0 121 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 PCYOX1Q9UHG3 505 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 SH3BGRL2Q9UJC5 107 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 TINAGQ9UJW2 476 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 NPIPA1Q9UND3 350 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 PACSIN2Q9UNF0 486 aaPredicted RBP3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF148Q9UQR1 794 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 RUVBL2Q9Y230 463 aaKnown RBP3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 NF1P21359 2839 aa3.67□□□□□ -1.82
SNRNP40-205ENST00000486941 ABCA2Q9BZC7 2435 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 NINQ8N4C6 2090 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 IGHV3-20A0A0C4DH32 117 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 GABRR3A8MPY1 467 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 MAGEB17A8MXT2 336 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 E5RI56 91 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 GFYI3L273 518 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 HSPB6O14558 160 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 HAT1O14929 419 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 P2RX6O15547 441 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 ZBTB14O43829 449 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 KIF5CO60282 957 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 NIPSNAP2O75323 286 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 KRT36O76013 467 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 TSPAN12O95859 305 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 SLC16A8O95907 504 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 FTCDO95954 541 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 MPC1LP0DKB6 136 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 ENO3P13929 434 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 ETS1P14921 441 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CD1EP15812 388 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 ABOP16442 354 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 OGNP20774 298 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 RPL22P35268 128 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 SKIV2L2P42285 1042 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 XCR1P46094 333 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 NUDT6P53370 316 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 RPS15AP62244 130 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 TUBA1BP68363 451 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CSNK1G2P78368 415 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CRADDP78560 199 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 MPP1Q00013 466 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 MAT1AQ00266 395 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CDK16Q00536 496 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 TLE4Q04727 773 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 ACTN3Q08043 901 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 TSTA3Q13630 321 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 RBM39Q14498 530 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 KCNJ11Q14654 390 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 RPS6KA1Q15418 735 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 NSDHLQ15738 373 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CCNG2Q16589 344 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 TTLL9Q3SXZ7 439 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 SFT2D3Q587I9 215 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 SEL1L2Q5TEA6 688 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 MFSD4BQ5TF39 518 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 KIAA0930Q6ICG6 404 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 TMEM211Q6ICI0 200 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 SPINK14Q6IE38 97 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 NEPROQ6NW34 567 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 PAPD4Q6PIY7 484 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 RAD9BQ6WBX8 426 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms