RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 STSP08842 583 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 OR8U8P0C7N1 319 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 VDAC1P21796 283 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 GABRR1P24046 479 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 TMOD1P28289 359 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 CDH5P33151 784 aaPredicted RBP1.84□□□□□ -2.11
VPS50-216ENST00000484954 CTRLP40313 264 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 CASP9P55211 416 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 KIAA1024LP59773 190 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 GALK2Q01415 458 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 OC90Q02509 493 aaPredicted RBP1.84□□□□□ -2.11
VPS50-216ENST00000484954 FAM133BQ5BKY9 247 aaKnown RBP1.84□□□□□ -2.11
VPS50-216ENST00000484954 FAM120AOSQ5T036 256 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 OR5M10Q6IEU7 315 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 YRDCQ86U90 279 aaKnown RBP1.84□□□□□ -2.11
VPS50-216ENST00000484954 GPBP1Q86WP2 473 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 CENPSQ8N2Z9 138 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 ZNF561Q8N587 486 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 ALLCQ8N6M5 410 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 C20orf203Q8NBC4 194 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 COLGALT1Q8NBJ5 622 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 ZNF540Q8NDQ6 660 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 MARCH1Q8TCQ1 289 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 ZNF721Q8TF20 911 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 MYDGFQ969H8 173 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 DTD2Q96FN9 168 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 TMEM245Q9H330 911 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 FAM124BQ9H5Z6 455 aaPredicted RBP1.84□□□□□ -2.11
VPS50-216ENST00000484954 SPRR3Q9UBC9 169 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 ZNF223Q9UK11 482 aaPredicted RBP1.84□□□□□ -2.11
VPS50-216ENST00000484954 PPIAL4AQ9Y536 164 aa1.84□□□□□ -2.11
VPS50-216ENST00000484954 PTCH1Q13635 1447 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 A0A0J9YXY3 114 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 A0A0U1RRA0 63 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 A0A1W2PRV1 198 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 MACROD2A1Z1Q3 448 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 LRRD1A4D1F6 860 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 SAGE2PA6NJ88 616 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 TM9SF1O15321 606 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 BUB1O43683 1085 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 NME2P1O60361 137 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 TBL1XO60907 577 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 ANP32DO95626 131 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 HSP90AA1P07900 732 aaKnown RBP1.83□□□□□ -2.12
VPS50-216ENST00000484954 ZCCHC18P0CG32 403 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 IGLL1P15814 213 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 CD1BP29016 333 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 ADORA2BP29275 332 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 AXLP30530 894 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 PLOD1Q02809 727 aaPredicted RBP1.83□□□□□ -2.12
VPS50-216ENST00000484954 BTG3Q14201 252 aaPredicted RBP1.83□□□□□ -2.12
VPS50-216ENST00000484954 ACSF3Q4G176 576 aaPredicted RBP1.83□□□□□ -2.12
VPS50-216ENST00000484954 BEND6Q5SZJ8 279 aaPredicted RBP1.83□□□□□ -2.12
VPS50-216ENST00000484954 SLC39A4Q6P5W5 647 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 C11orf88Q6PI97 169 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 ZNF410Q86VK4 478 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 PPP1R27Q86WC6 154 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 ZNF786Q8N393 782 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 OR2A12Q8NGT7 310 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 ART4Q93070 314 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 PTP4A1Q93096 173 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 TMEM80Q96HE8 168 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 TMEM101Q96IK0 257 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 SMIM14Q96QK8 99 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 CBWD1Q9BRT8 395 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 NANSQ9NR45 359 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 DUS2Q9NX74 493 aaKnown RBP1.83□□□□□ -2.12
VPS50-216ENST00000484954 OR1A1Q9P1Q5 309 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 FAM153AQ9UHL3 310 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 NAP1L2Q9ULW6 460 aaPredicted RBP1.83□□□□□ -2.12
VPS50-216ENST00000484954 EXOSC1Q9Y3B2 195 aaKnown RBP1.83□□□□□ -2.12
VPS50-216ENST00000484954 CACNG2Q9Y698 323 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 PARD3Q8TEW0 1356 aa1.83□□□□□ -2.12
VPS50-216ENST00000484954 THSD7BQ9C0I4 1608 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 IGKV2D-24A0A075B6R9 120 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 ZSCAN5BA6NJL1 495 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 RAMP1O60894 148 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 IGHV3-48P01763 117 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 CD55P08174 381 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 GNSP15586 552 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 HNRNPA2B1P22626 353 aaKnown RBP1.82□□□□□ -2.12
VPS50-216ENST00000484954 NUP107P57740 925 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 ZP4Q12836 540 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 ZNF154Q13106 437 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 UBE2V2Q15819 145 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 AANATQ16613 207 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 LRRC36Q1X8D7 754 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 ZNF674Q2M3X9 581 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 EOGTQ5NDL2 527 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 SLX4IPQ5VYV7 408 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 LEG1Q6P5S2 330 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 ZNF100Q8IYN0 542 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 ARFGAP2Q8N6H7 521 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 SUMF2Q8NBJ7 301 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 NEIL3Q8TAT5 605 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 PHYHIPQ92561 330 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 TAF4BQ92750 862 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 ADIPOR1Q96A54 375 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 FGGYQ96C11 551 aa1.82□□□□□ -2.12
VPS50-216ENST00000484954 NRTNQ99748 197 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms