RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 NMRK1Q9NWW6 199 aa12.51□□□□□ -0.41
VARS-226ENST00000483275 TMEM216Q9P0N5 145 aa12.51□□□□□ -0.41
VARS-226ENST00000483275 CR1P17927 2039 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 GXYLT2A0PJZ3 443 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 FADS1O60427 444 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 DLX3O60479 287 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 PLOD3O60568 738 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 BCAS2O75934 225 aaPredicted RBP12.5□□□□□ -0.41
VARS-226ENST00000483275 CRHP06850 196 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 ANXA4P09525 319 aaPredicted RBP12.5□□□□□ -0.41
VARS-226ENST00000483275 PTH2RP49190 550 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 SERPINB9P50453 376 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 NR1H2P55055 460 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 FOXA1P55317 472 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 BCL2A1Q16548 175 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 GLE1Q53GS7 698 aaKnown RBP12.5□□□□□ -0.41
VARS-226ENST00000483275 ALKBH2Q6NS38 261 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 LRRC75A-AS1Q8N1F1 130 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 LRRN4CLQ8ND94 238 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 FBXO30Q8TB52 745 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 DUSP19Q8WTR2 217 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 IFT81Q8WYA0 676 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 SLC9A6Q92581 669 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 C1GALT1C1Q96EU7 318 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 ZNF382Q96SR6 550 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 PIP5K1AQ99755 562 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 KLHDC3Q9BQ90 382 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 SLC39A3Q9BRY0 314 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 EQTNQ9NQ60 294 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 TAS2R9Q9NYW1 312 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 ADAM21Q9UKJ8 722 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 PROCRQ9UNN8 238 aa12.5□□□□□ -0.41
VARS-226ENST00000483275 MRPS18CQ9Y3D5 142 aaKnown RBP12.5□□□□□ -0.41
VARS-226ENST00000483275 ANK3Q12955 4377 aaKnown RBP12.5□□□□□ -0.41
VARS-226ENST00000483275 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 CHD3Q12873 2000 aaKnown RBP12.49□□□□□ -0.41
VARS-226ENST00000483275 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.49□□□□□ -0.41
VARS-226ENST00000483275 GOLGA8RI6L899 631 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 EMC8O43402 210 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 ULK1O75385 1050 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 UTS2O95399 124 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 IGKV1D-16P01601 117 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 COL6A2P12110 1019 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 HSD3B1P14060 373 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 FPR1P21462 350 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 HSD3B2P26439 372 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 HEPACAMQ14CZ8 416 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 GUSBP1Q15486 140 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 SPIN4Q56A73 249 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 SPDYAQ5MJ70 313 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 APOOLQ6UXV4 268 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 GGNQ86UU5 652 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 GBP7Q8N8V2 638 aaPredicted RBP12.49□□□□□ -0.41
VARS-226ENST00000483275 GATSQ8NAP1 163 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 NOA1Q8NC60 698 aaKnown RBP12.49□□□□□ -0.41
VARS-226ENST00000483275 MAPK1IP1LQ8NDC0 245 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 ERP27Q96DN0 273 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 BDH2Q9BUT1 245 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 FUT8Q9BYC5 575 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 TMEM185BQ9H7F4 350 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 DDX18Q9NVP1 670 aaKnown RBP12.49□□□□□ -0.41
VARS-226ENST00000483275 VDAC3Q9Y277 283 aa12.49□□□□□ -0.41
VARS-226ENST00000483275 POLR3HQ9Y535 204 aaPredicted RBP12.49□□□□□ -0.41
VARS-226ENST00000483275 UQCRHLA0A096LP55 91 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 FAM171A2A8MVW0 826 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 MYO1GB0I1T2 1018 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 UPK1AO00322 258 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 UBFD1O14562 309 aaKnown RBP12.48□□□□□ -0.41
VARS-226ENST00000483275 EIF1AYO14602 144 aaKnown RBP12.48□□□□□ -0.41
VARS-226ENST00000483275 COQ9O75208 318 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 TNFRSF21O75509 655 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 CNOT4O95628 575 aaKnown RBP12.48□□□□□ -0.41
VARS-226ENST00000483275 DDCP20711 480 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 GCAP28676 217 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 ECHS1P30084 290 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 MPIP34949 423 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 EIF1AXP47813 144 aaKnown RBP12.48□□□□□ -0.41
VARS-226ENST00000483275 EEF1A1P68104 462 aaKnown RBP12.48□□□□□ -0.41
VARS-226ENST00000483275 MRPS22P82650 360 aaKnown RBP12.48□□□□□ -0.41
VARS-226ENST00000483275 C2orf80Q0P641 193 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 GRAMD1BQ3KR37 738 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 EEF1A1P5Q5VTE0 462 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 ANKRD26P1Q6NSI1 321 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 C20orf204Q6ZNR8 217 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 EXOC3L1Q86VI1 746 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 WFDC8Q8IUA0 241 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 PIK3R3Q92569 461 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 DTNBP1Q96EV8 351 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 C11orf24Q96F05 449 aaPredicted RBP12.48□□□□□ -0.41
VARS-226ENST00000483275 OTUB1Q96FW1 271 aaPredicted RBP12.48□□□□□ -0.41
VARS-226ENST00000483275 FMO2Q99518 471 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 TSPYL1Q9H0U9 437 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 GLIPR2Q9H4G4 154 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 FAM120CQ9NX05 1096 aaKnown RBP12.48□□□□□ -0.41
VARS-226ENST00000483275 ELOVL5Q9NYP7 299 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 ABCG2Q9UNQ0 655 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 C19orf53Q9UNZ5 99 aaPredicted RBP12.48□□□□□ -0.41
VARS-226ENST00000483275 ZNF175Q9Y473 711 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 PTGDR2Q9Y5Y4 395 aa12.48□□□□□ -0.41
VARS-226ENST00000483275 EXOC1LA0A1B0GW35 172 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms