RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-219	ENST00000474036	RPS21	P63220	83 aa	Known RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	IRX1	P78414	480 aa	Predicted RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	PLOD1	Q02809	727 aa	Predicted RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	HSPA14	Q0VDF9	509 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	RCAN2	Q14206	197 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	NRF1	Q16656	503 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	SYTL3	Q4VX76	610 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	COQ5	Q5HYK3	327 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	LCN8	Q6JVE9	175 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	IYD	Q6PHW0	289 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	ERN2	Q76MJ5	926 aa	Known RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	HSD11B1L	Q7Z5J1	315 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	TAF8	Q7Z7C8	310 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	APLF	Q8IW19	511 aa	Predicted RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	LIX1	Q8N485	282 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	MARVELD2	Q8N4S9	558 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	KRTCAP2	Q8N6L1	136 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	CANT1	Q8WVQ1	401 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	ELMO1	Q92556	727 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	ZUFSP	Q96AP4	578 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	ISG20	Q96AZ6	181 aa	Known RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	RHBDF1	Q96CC6	855 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	CTHRC1	Q96CG8	243 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	ECHDC3	Q96DC8	303 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	SNRNP40	Q96DI7	357 aa	Known RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	SCRN2	Q96FV2	425 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	PPP3R2	Q96LZ3	170 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	PPM1M	Q96MI6	270 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	ZNF641	Q96N77	438 aa	Predicted RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	MCCC1	Q96RQ3	725 aa	Predicted RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	SLC29A1	Q99808	456 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	CIB1	Q99828	191 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	CENPK	Q9BS16	269 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	DPCD	Q9BVM2	203 aa	Predicted RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	RIOK2	Q9BVS4	552 aa	Known RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	DPEP2	Q9H4A9	486 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	ACTR8	Q9H981	624 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	LRTM1	Q9HBL6	345 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	APMAP	Q9HDC9	416 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	ARL15	Q9NXU5	204 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	UBAP1	Q9NZ09	502 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	ABCD2	Q9UBJ2	740 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	LPAR3	Q9UBY5	353 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	CIDEB	Q9UHD4	219 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	PILRA	Q9UKJ1	303 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	RAB26	Q9ULW5	256 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	PCDHGB4	Q9UN71	923 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	PDE10A	Q9Y233	779 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	EIF3L	Q9Y262	564 aa	Known RBP	4.86	□□□□□ -1.63
FN1-219	ENST00000474036	PCDHGB5	Q9Y5G0	923 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	AKAP6	Q13023	2319 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	NBEAL1	Q6ZS30	2694 aa		4.86	□□□□□ -1.63
FN1-219	ENST00000474036	SPTB	P11277	2137 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	ABCA4	P78363	2273 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	POLE	Q07864	2286 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	JMJD1C	Q15652	2540 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	IGLV3-16	A0A075B6K0	115 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	OR2AG2	A6NM03	316 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	AQP12B	A6NM10	295 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	PDLIM1	O00151	329 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	PLOD2	O00469	737 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	SOCS2	O14508	198 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	DENR	O43583	198 aa	Known RBP	4.85	□□□□□ -1.63
FN1-219	ENST00000474036	SEC22B	O75396	215 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	JTB	O76095	146 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	STK17B	O94768	372 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	PGM3	O95394	542 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	CLDN9	O95484	217 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	PDYN	P01213	254 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	KRT6A	P02538	564 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	CSTB	P04080	98 aa	Known RBP	4.85	□□□□□ -1.63
FN1-219	ENST00000474036	KRT6B	P04259	564 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	ANXA2	P07355	339 aa	Known RBP	4.85	□□□□□ -1.63
FN1-219	ENST00000474036	ANXA5	P08758	320 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	FAM58BP	P0C7Q3	252 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	MPC1L	P0DKB6	136 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	CBSL	P0DN79	551 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	ADRB3	P13945	408 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	HSD3B1	P14060	373 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	ATP6V1B1	P15313	513 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	ZNF26	P17031	533 aa	Predicted RBP	4.85	□□□□□ -1.63
FN1-219	ENST00000474036	CYP2A7	P20853	494 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	IL10	P22301	178 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	HRH2	P25021	359 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	PSMA4	P25789	261 aa	Known RBP	4.85	□□□□□ -1.63
FN1-219	ENST00000474036	CBS	P35520	551 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	GGT5	P36269	586 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	MAPK9	P45984	424 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	BDKRB1	P46663	353 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	KRT6C	P48668	564 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	TIRAP	P58753	221 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	SSBP2	P81877	361 aa	Predicted RBP	4.85	□□□□□ -1.63
FN1-219	ENST00000474036	MYBPC1	Q00872	1141 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	PSG6	Q00889	435 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	ABR	Q12979	859 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	PRKG2	Q13237	762 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	PTGR1	Q14914	329 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	ACOX1	Q15067	660 aa		4.85	□□□□□ -1.63
FN1-219	ENST00000474036	CYP51A1	Q16850	503 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms