RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 VPS33AQ96AX1 596 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 CMTM5Q96DZ9 223 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 CCDC115Q96NT0 180 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 SECISBP2Q96T21 854 aaKnown RBP11.99□□□□□ -0.49
TPM3-216ENST00000473036 DEFB127Q9H1M4 99 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 IL1RL2Q9HB29 575 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 C3orf14Q9HBI5 128 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 BTNL2Q9UIR0 455 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 POLQO75417 2590 aa11.99□□□□□ -0.49
TPM3-216ENST00000473036 PRAMEF27A3QJZ7 478 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 CAPN14A8MX76 684 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 TP53I11O14683 189 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 CFLARO15519 480 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 ASNA1O43681 348 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 PDE9AO76083 593 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 KCNK2O95069 426 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 IL33O95760 270 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 IL6P05231 212 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 GSNP06396 782 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 HOXB9P17482 250 aaPredicted RBP11.98□□□□□ -0.49
TPM3-216ENST00000473036 ENDOUP21128 410 aaKnown RBP11.98□□□□□ -0.49
TPM3-216ENST00000473036 S100A3P33764 101 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 PNLIPRP2P54317 469 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 PRR5P85299 388 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 TP53BP2Q13625 1128 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 CYP27C1Q4G0S4 372 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 CCNJQ5T5M9 372 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 CDC73Q6P1J9 531 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 FIGNL1Q6PIW4 674 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 GFRALQ6UXV0 394 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 OLIG3Q7RTU3 272 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 C6orf120Q7Z4R8 191 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 MTDHQ86UE4 582 aaKnown RBP11.98□□□□□ -0.49
TPM3-216ENST00000473036 CDRT4Q8N9R6 151 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 FAM98AQ8NCA5 519 aaKnown RBP11.98□□□□□ -0.49
TPM3-216ENST00000473036 OR5D16Q8NGK9 328 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 GPR151Q8TDV0 419 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 CDS1Q92903 461 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 RMND5BQ96G75 393 aaPredicted RBP11.98□□□□□ -0.49
TPM3-216ENST00000473036 GNRHR2Q96P88 292 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 OR52E6Q96RD3 313 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 DOHHQ9BU89 302 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 UBQLN3Q9H347 655 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 ZNF703Q9H7S9 590 aaPredicted RBP11.98□□□□□ -0.49
TPM3-216ENST00000473036 NEUROD4Q9HD90 331 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 ZFP64Q9NPA5 681 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
TPM3-216ENST00000473036 FAM120CQ9NX05 1096 aaKnown RBP11.98□□□□□ -0.49
TPM3-216ENST00000473036 SEC14L3Q9UDX4 400 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 OR10H1Q9Y4A9 318 aa11.98□□□□□ -0.49
TPM3-216ENST00000473036 RNF103-CHMP3A0A140T963 221 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 PRAMEF25A6NGN4 478 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 TFECO14948 347 aaPredicted RBP11.97□□□□□ -0.49
TPM3-216ENST00000473036 SOAT1P35610 550 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 TMED10P49755 219 aaKnown RBP11.97□□□□□ -0.49
TPM3-216ENST00000473036 POLR2JP52435 117 aaKnown RBP11.97□□□□□ -0.49
TPM3-216ENST00000473036 KCNJ2P63252 427 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 STX5Q13190 355 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 GRAMD1BQ3KR37 738 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 GTDC1Q4AE62 458 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 ANXA8L1Q5VT79 327 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 SAXO2Q658L1 398 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 FAM91A1Q658Y4 838 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 ZCCHC12Q6PEW1 402 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 GK5Q6ZS86 529 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 OR56A1Q8NGH5 318 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 MARVELD3Q96A59 401 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 OR7D2Q96RA2 312 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 KLHDC3Q9BQ90 382 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 ACTRT3Q9BYD9 372 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 PIGUQ9H490 435 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 Q9N2J8 555 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 SAR1AQ9NR31 198 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 TNFRSF10DQ9UBN6 386 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 OSGIN2Q9Y236 505 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 ZNF835Q9Y2P0 537 aa11.97□□□□□ -0.49
TPM3-216ENST00000473036 A0A1B0GTH9 108 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 FAM234BA2RU67 622 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 EBAG9O00559 213 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 GNB5O14775 395 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 SNPHO15079 494 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 IGHG3P01860 377 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 ALOX5P09917 674 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 POU3F2P20265 443 aaPredicted RBP11.96□□□□□ -0.49
TPM3-216ENST00000473036 CAPN3P20807 821 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 UQCRC2P22695 453 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 IL12BP29460 328 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 PRDX6P30041 224 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 EVI2BP34910 448 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 RFX3P48380 749 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 PRIM2P49643 509 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 MVDP53602 400 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 PLGLB1Q02325 96 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 FUT5Q11128 374 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 DECR1Q16698 335 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 SPDYE7PQ495Y7 208 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 TIGD2Q4W5G0 525 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 EMC4Q5J8M3 183 aa11.96□□□□□ -0.49
TPM3-216ENST00000473036 TIGD3Q6B0B8 471 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms