RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PRICKLE2Q7Z3G6 844 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 TRMT11Q7Z4G4 463 aaKnown RBP9.49□□□□□ -0.89
APTX-216ENST00000472896 OR6C4Q8NGE1 309 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 OR8J2Q8NGG1 315 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 OR8J1Q8NGP2 316 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 C1GALT1C1Q96EU7 318 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 SIPA1Q96FS4 1042 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 SCRN2Q96FV2 425 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 FCRL1Q96LA6 429 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 FERD3LQ96RJ6 166 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 C12orf57Q99622 126 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 TSSK6Q9BXA6 273 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 ZDHHC5Q9C0B5 715 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 FN3KQ9H479 309 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 TM7SF3Q9NS93 570 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 CPNE7Q9UBL6 633 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 DUX4Q9UBX2 424 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 NDRG3Q9UGV2 375 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 PCDHB1Q9Y5F3 818 aa9.49□□□□□ -0.89
APTX-216ENST00000472896 TMEM129A0AVI4 362 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 OR6C65A6NJZ3 312 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 C2orf81A6NN90 581 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 TMEM229AB2RXF0 380 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 DNASE2O00115 360 aaPredicted RBP9.48□□□□□ -0.89
APTX-216ENST00000472896 KPNA3O00505 521 aaPredicted RBP9.48□□□□□ -0.89
APTX-216ENST00000472896 GPR171O14626 319 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 ATXN7O15265 892 aaPredicted RBP9.48□□□□□ -0.89
APTX-216ENST00000472896 COCHO43405 550 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 SIGLEC6O43699 453 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 ACSL4O60488 711 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 OR5F1O95221 314 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 GADD45GO95257 159 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 CLDN9O95484 217 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 H2AFB1P0C5Y9 115 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 H2AFB2P0C5Z0 115 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 GNSP15586 552 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 SDC1P18827 310 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 GALP22466 123 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 AHCYP23526 432 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 XCR1P46094 333 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 RGS4P49798 205 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 DCDC1P59894 354 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 IHHQ14623 411 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 ETFDHQ16134 617 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 NTRK2Q16620 822 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 HLA-BQ31612 363 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 PABPC1L2AQ5JQF8 200 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 B3GNTL1Q67FW5 361 aaPredicted RBP9.48□□□□□ -0.89
APTX-216ENST00000472896 FAM198BQ6UWH4 519 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 WASH2PQ6VEQ5 465 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 USP45Q70EL2 814 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 KIAA0907Q7Z7F0 614 aaPredicted RBP9.48□□□□□ -0.89
APTX-216ENST00000472896 MCATQ8IVS2 390 aaKnown RBP9.48□□□□□ -0.89
APTX-216ENST00000472896 ZNF843Q8N446 348 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 BVESQ8NE79 360 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 OR9Q2Q8NGE9 314 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 OR8K3Q8NH51 312 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 RHBDD1Q8TEB9 315 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 GEMIN6Q8WXD5 167 aaKnown RBP9.48□□□□□ -0.89
APTX-216ENST00000472896 HMCESQ96FZ2 354 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 MYO19Q96H55 970 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 PCED1BQ96HM7 432 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 GABRG3Q99928 467 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 SEMA3CQ99985 751 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 NLNQ9BYT8 704 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 ACPTQ9BZG2 426 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 PRORYQ9H606 182 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 TPT1P8Q9HAU6 139 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 SPHK2Q9NRA0 654 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 ABCC13Q9NSE7 274 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 TMEM248Q9NWD8 314 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 WSB2Q9NYS7 404 aaPredicted RBP9.48□□□□□ -0.89
APTX-216ENST00000472896 WWOXQ9NZC7 414 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 SUSD2Q9UGT4 822 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 BTNL2Q9UIR0 455 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 FZD4Q9ULV1 537 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 DLGAP4Q9Y2H0 992 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 MRPS7Q9Y2R9 242 aaKnown RBP9.48□□□□□ -0.89
APTX-216ENST00000472896 SPIN1Q9Y657 262 aaPredicted RBP9.48□□□□□ -0.89
APTX-216ENST00000472896 SLCO1B1Q9Y6L6 691 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 KNTC1P50748 2209 aa9.48□□□□□ -0.89
APTX-216ENST00000472896 ANKDD1BA6NHY2 528 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 M0R129 80 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ITGA10O75578 1167 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 ZNF883P0CG24 379 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 PRSS56P0CW18 603 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 TYRP14679 529 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 EPB42P16452 691 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 RHCEP18577 417 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 RBMS1P29558 406 aaKnown RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 CD96P40200 585 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 RFX3P48380 749 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 PGFP49763 221 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CLCN7P51798 805 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 CRYBA2P53672 197 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 WNT3P56703 355 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 COX10Q12887 443 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 BOP1Q14137 746 aaKnown RBP9.47□□□□□ -0.89
APTX-216ENST00000472896 HEPACAMQ14CZ8 416 aa9.47□□□□□ -0.89
APTX-216ENST00000472896 C18orf21Q32NC0 220 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms