RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 C10orf107Q8IVU9 208 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 HOMEZQ8IX15 550 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 OR2L13Q8N349 312 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 OR2M3Q8NG83 312 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 OR5M1Q8NGP8 315 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 CEP70Q8NHQ1 597 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 DUSP19Q8WTR2 217 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 JADE3Q92613 823 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 NTNG2Q96CW9 530 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 ZBED6CLQ96FA7 236 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-206ENST00000466591 TSSK3Q96PN8 268 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 EML4Q9HC35 981 aaKnown RBP15.86■□□□□ 0.13
COL7A1-206ENST00000466591 HHATLQ9HCP6 504 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 TAS2R7Q9NYW3 318 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 CLCF1Q9UBD9 225 aa15.86■□□□□ 0.13
COL7A1-206ENST00000466591 TEP1Q99973 2627 aaKnown RBP15.86■□□□□ 0.13
COL7A1-206ENST00000466591 GOSR1O95249 250 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 HPCAL1P37235 193 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 C17orf67Q0P5P2 114 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 PAMR1Q6UXH9 720 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 ZNF551Q7Z340 670 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-206ENST00000466591 TDRPQ86YL5 185 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 EIF1ADQ8N9N8 165 aaKnown RBP15.85■□□□□ 0.13
COL7A1-206ENST00000466591 CLHC1Q8NHS4 586 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 FBXO30Q8TB52 745 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 C11orf24Q96F05 449 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-206ENST00000466591 DACH2Q96NX9 599 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 CCT7Q99832 543 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 TRMOQ9BU70 441 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 PINK1Q9BXM7 581 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 C12orf65Q9H3J6 166 aaKnown RBP15.85■□□□□ 0.13
COL7A1-206ENST00000466591 REEP4Q9H6H4 257 aa15.85■□□□□ 0.13
COL7A1-206ENST00000466591 A0A1W2PNV4 684 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 TMEM114B3SHH9 223 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 ZIC3O60481 467 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 TRIM13O60858 407 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 UTS2O95399 124 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 ANGPTL1O95841 491 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 TGM6O95932 706 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 PLGP00747 810 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-206ENST00000466591 LINC00032P0C843 101 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 MAPK1P28482 360 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 ASMTP46597 345 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 GAS1P54826 345 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 R3HCC1LQ7Z5L2 792 aaKnown RBP15.84■□□□□ 0.13
COL7A1-206ENST00000466591 FADS6Q8N9I5 356 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 NUP43Q8NFH3 380 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 AGR3Q8TD06 166 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 PIK3R3Q92569 461 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 CIDECQ96AQ7 238 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-206ENST00000466591 EGLN2Q96KS0 407 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 UCN2Q96RP3 112 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 SLC39A3Q9BRY0 314 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 LMF2Q9BU23 707 aaKnown RBP15.84■□□□□ 0.13
COL7A1-206ENST00000466591 MED18Q9BUE0 208 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 ZNF226Q9NYT6 803 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 FLRT3Q9NZU0 649 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 JKAMPQ9P055 326 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 VDAC3Q9Y277 283 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 PTGDR2Q9Y5Y4 395 aa15.84■□□□□ 0.13
COL7A1-206ENST00000466591 C17orf51A8MQB3 221 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 MSTNO14793 375 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 NDUFB5O43674 189 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 FADS1O60427 444 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 CRHP06850 196 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 FCGR2AP12318 317 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 KLK2P20151 261 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 ZNF41P51814 821 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-206ENST00000466591 PRR5P85299 388 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 FGFBP1Q14512 234 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 PRSS53Q2L4Q9 553 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 GALNT10Q86SR1 603 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 TGIF2LYQ8IUE0 185 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 COX18Q8N8Q8 333 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 CDRT4Q8N9R6 151 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 C1GALT1C1Q96EU7 318 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 PGM2Q96G03 612 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 APOPT1Q96IL0 206 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 ZNF845Q96IR2 970 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-206ENST00000466591 MS4A4EQ96PG1 132 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 ALPK1Q96QP1 1244 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 TMED5Q9Y3A6 229 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 ZNF337Q9Y3M9 751 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 SNX8Q9Y5X2 465 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 KIAA1549Q9HCM3 1950 aa15.83■□□□□ 0.12
COL7A1-206ENST00000466591 GXYLT2A0PJZ3 443 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 OR2M5A3KFT3 312 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 A8MXE2 369 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 SCDO00767 359 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 ALOX5P09917 674 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 POU2F1P14859 743 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 ME2P23368 584 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 PRPH2P23942 346 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 RPL3P39023 403 aaKnown RBP15.82■□□□□ 0.12
COL7A1-206ENST00000466591 EIF1AXP47813 144 aaKnown RBP15.82■□□□□ 0.12
COL7A1-206ENST00000466591 PRIM2P49643 509 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 PON3Q15166 354 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 GRAMD1BQ3KR37 738 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 SPDYE7PQ495Y7 208 aa15.82■□□□□ 0.12
COL7A1-206ENST00000466591 ADGRE4PQ86SQ3 457 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms