RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 GOT1L1Q8NHS2 421 aaPredicted RBP10.65□□□□□ -0.7
CUX1-207ENST00000465461 FAM110BQ8TC76 370 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 MOAP1Q96BY2 351 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 TMEM41AQ96HV5 264 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 ZNF597Q96LX8 424 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 ZNF317Q96PQ6 595 aaPredicted RBP10.65□□□□□ -0.7
CUX1-207ENST00000465461 STACQ99469 402 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 BTBD2Q9BX70 525 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 SLC6A15Q9H2J7 730 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 ZNF703Q9H7S9 590 aaPredicted RBP10.65□□□□□ -0.7
CUX1-207ENST00000465461 ZDHHC11Q9H8X9 412 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 TINAGQ9UJW2 476 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 FBXL2Q9UKC9 423 aa10.65□□□□□ -0.7
CUX1-207ENST00000465461 MRTO4Q9UKD2 239 aaKnown RBP10.65□□□□□ -0.7
CUX1-207ENST00000465461 ESPL1Q14674 2120 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 TTC36A6NLP5 189 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 SNPHO15079 494 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 SLC19A2O60779 497 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 ANP32DO95626 131 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 TROVE2P10155 538 aaKnown RBP eCLIP10.64□□□□□ -0.71
CUX1-207ENST00000465461 CAPN3P20807 821 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 ENDOUP21128 410 aaKnown RBP10.64□□□□□ -0.71
CUX1-207ENST00000465461 PTPN6P29350 595 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 MRPL19P49406 292 aaKnown RBP10.64□□□□□ -0.71
CUX1-207ENST00000465461 SQLEQ14534 574 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 SLC10A1Q14973 349 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 C3AR1Q16581 482 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 EIPR1Q53HC9 387 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 PAGE3Q5JUK9 113 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 WIPI1Q5MNZ9 446 aaPredicted RBP10.64□□□□□ -0.71
CUX1-207ENST00000465461 COX20Q5RI15 118 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 C6orf10Q5SRN2 563 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 DCST2Q5T1A1 773 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 TIGD3Q6B0B8 471 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 BHLHB9Q6PI77 547 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 BLOC1S3Q6QNY0 202 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 NCCRP1Q6ZVX7 275 aaPredicted RBP10.64□□□□□ -0.71
CUX1-207ENST00000465461 TRILQ7L0X0 811 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 HMGN2P46Q86SG4 172 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 YRDCQ86U90 279 aaKnown RBP10.64□□□□□ -0.71
CUX1-207ENST00000465461 FJX1Q86VR8 437 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 RNF138Q8WVD3 245 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 XAGE5Q8WWM1 108 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 AURKBQ96GD4 344 aaPredicted RBP10.64□□□□□ -0.71
CUX1-207ENST00000465461 ZNF385DQ9H6B1 395 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 LDAHQ9H6V9 325 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 EXO5Q9H790 373 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 SLC52A3Q9NQ40 469 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 DUSP22Q9NRW4 184 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 RYDENQ9NUL5 291 aaKnown RBP10.64□□□□□ -0.71
CUX1-207ENST00000465461 MED11Q9P086 117 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 SLAMF8Q9P0V8 285 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 ERRFI1Q9UJM3 462 aaPredicted RBP10.64□□□□□ -0.71
CUX1-207ENST00000465461 C15orf41Q9Y2V0 281 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 WIF1Q9Y5W5 379 aa10.64□□□□□ -0.71
CUX1-207ENST00000465461 TRGV5A0A0B4J1U4 118 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 PRAMEF27A3QJZ7 478 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 NPIPA2E9PIF3 369 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 NPIPA3F8WFD2 350 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 LRRTM2O43300 516 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 FCMRO60667 390 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 OXSR1O95747 527 aaPredicted RBP10.63□□□□□ -0.71
CUX1-207ENST00000465461 ABOP16442 354 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 PTGS2P35354 604 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 ATP4BP51164 291 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 PSMD4P55036 377 aaKnown RBP10.63□□□□□ -0.71
CUX1-207ENST00000465461 PSPHP78330 225 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 SNTA1Q13424 505 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 UBAP2LQ14157 1087 aaKnown RBP10.63□□□□□ -0.71
CUX1-207ENST00000465461 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.63□□□□□ -0.71
CUX1-207ENST00000465461 TMEM81Q6P7N7 255 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 OR5M9Q8NGP3 310 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 ZFP90Q8TF47 636 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 DUSP19Q8WTR2 217 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 GTF2H4Q92759 462 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 SPDL1Q96EA4 605 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 NEURL3Q96EH8 262 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 ITCHQ96J02 903 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 SDF2Q99470 211 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 KLHDC3Q9BQ90 382 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 SIKE1Q9BRV8 207 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 PAIP1Q9H074 479 aaKnown RBP10.63□□□□□ -0.71
CUX1-207ENST00000465461 UBQLN3Q9H347 655 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 DSN1Q9H410 356 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 RABEP2Q9H5N1 569 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 RMND5AQ9H871 391 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 PPP4R1LQ9P1A2 415 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 SPRR3Q9UBC9 169 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 ZNF835Q9Y2P0 537 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 SLC6A5Q9Y345 797 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 FREM3P0C091 2139 aa10.63□□□□□ -0.71
CUX1-207ENST00000465461 CENPVL1A0A0U1RR11 272 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 HMGN4O00479 90 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 ANGPTL1O95841 491 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 IGHG3P01860 377 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 TPOP07202 933 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 KRT16P08779 473 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 STSP08842 583 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 ATP6V1C1P21283 382 aa10.62□□□□□ -0.71
CUX1-207ENST00000465461 RBPJQ06330 500 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms