RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 GSTA4O15217 222 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 ABCB7O75027 752 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 CEACAM4O75871 244 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 ETS2P15036 469 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 NCK1P16333 377 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 ATP6V1C1P21283 382 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 KDELR2P33947 212 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 TMED10P49755 219 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 SSR4P51571 173 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 CRYBA2P53672 197 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 TMPRSS3P57727 454 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 IRAK1BP1Q5VVH5 260 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 GLYATQ6IB77 296 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 GALNT10Q86SR1 603 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 PATL1Q86TB9 770 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 ZNF619Q8N2I2 560 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 KDF1Q8NAX2 398 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 OR52E4Q8NGH9 312 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 SNRNP27Q8WVK2 155 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 FIG4Q92562 907 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 CPNE5Q9HCH3 593 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 MKLN1Q9UL63 735 aa15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 GPC6Q9Y625 555 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-202ENST00000455220 ANKRD65E5RJM6 399 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 CDK2AP1O14519 115 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 REM1O75628 298 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 PDE9AO76083 593 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 RPS4Y1P22090 263 aaKnown RBP15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 IL12BP29460 328 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 AQP1P29972 269 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 KRT20P35900 424 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 SOX3P41225 446 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 RFX3P48380 749 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 NTRK2Q16620 822 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 ZNF791Q3KP31 576 aaPredicted RBP15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 FLYWCH1Q4VC44 716 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 LCN8Q6JVE9 175 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 OPN5Q6U736 354 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 DND1Q8IYX4 353 aaKnown RBP15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 OIT3Q8WWZ8 545 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 SPACA9Q96E40 222 aaPredicted RBP15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 COL21A1Q96P44 957 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 ADOQ96SZ5 270 aa15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 MTHFD2LQ9H903 347 aaPredicted RBP15.27■□□□□ 0.03
CCDC90B-202ENST00000455220 UGT2B11O75310 529 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 OR6B1O95007 311 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 NGFRP08138 427 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 ATP6V1B2P21281 511 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 POLE2P56282 527 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 EFR3AQ14156 821 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 AGAP7PQ5VUJ5 663 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 DHFR2Q86XF0 187 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 KRT73Q86Y46 540 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 HGDQ93099 445 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 ZG16BQ96DA0 208 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 AGAP4Q96P64 663 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 ZNF607Q96SK3 696 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 ZNF552Q9H707 407 aaPredicted RBP15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 GPR83Q9NYM4 423 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 KCNE5Q9UJ90 142 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 CNTRLQ7Z7A1 2325 aa15.26■□□□□ 0.03
CCDC90B-202ENST00000455220 AGAP5A6NIR3 686 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 M0QX08 132 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 GMNNO75496 209 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 UGT2B17O75795 530 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 CIB2O75838 187 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 ALPPP05187 535 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 CYP4B1P13584 511 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 DCTP40126 519 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 CCL11P51671 97 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 ATP12AP54707 1039 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 FBXW4P57775 412 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 ELOAQ14241 798 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 GPR68Q15743 365 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 ZNF141Q15928 474 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 ABHD17BQ5VST6 288 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 NUP54Q7Z3B4 507 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 GPALPP1Q8IXQ4 340 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 BEST3Q8N1M1 668 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 FAM13CQ8NE31 585 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 RNF138Q8WVD3 245 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 APOBEC4Q8WW27 367 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 ASB15Q8WXK1 588 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 TTC9Q92623 222 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 TAMM41Q96BW9 452 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 NSMCE2Q96MF7 247 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 HOXD1Q9GZZ0 328 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 QRSL1Q9H0R6 528 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 TRIM45Q9H8W5 580 aaPredicted RBP15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 ZBTB20Q9HC78 741 aaPredicted RBP15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 STMN3Q9NZ72 180 aa15.25■□□□□ 0.03
CCDC90B-202ENST00000455220 NPIPA5A0A0B4J1W7 369 aa15.24■□□□□ 0.03
CCDC90B-202ENST00000455220 A6NL46 340 aa15.24■□□□□ 0.03
CCDC90B-202ENST00000455220 NPIPA7E9PJI5 369 aa15.24■□□□□ 0.03
CCDC90B-202ENST00000455220 ICOSLGO75144 302 aa15.24■□□□□ 0.03
CCDC90B-202ENST00000455220 SERPINB7O75635 380 aa15.24■□□□□ 0.03
CCDC90B-202ENST00000455220 MFN2O95140 757 aa15.24■□□□□ 0.03
CCDC90B-202ENST00000455220 UTS2O95399 124 aa15.24■□□□□ 0.03
CCDC90B-202ENST00000455220 NPIPA8P0DM63 369 aa15.24■□□□□ 0.03
CCDC90B-202ENST00000455220 FLOT2Q14254 428 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms