RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TCEA1P23193 301 aaKnown RBP13.52□□□□□ -0.25
HDAC4-204ENST00000446876 ELAVL4P26378 380 aaKnown RBP13.52□□□□□ -0.25
HDAC4-204ENST00000446876 COL8A1P27658 744 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 PRIM2P49643 509 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 DGKQP52824 942 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 CLNS1AP54105 237 aaKnown RBP13.52□□□□□ -0.25
HDAC4-204ENST00000446876 RPS26P62854 115 aaKnown RBP13.52□□□□□ -0.25
HDAC4-204ENST00000446876 GRAMD1BQ3KR37 738 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 VPS26BQ4G0F5 336 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 GXYLT1Q4G148 440 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 ZNF585AQ6P3V2 769 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 MRGPRGQ86SM5 289 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 COX18Q8N8Q8 333 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 FAM83FQ8NEG4 500 aaPredicted RBP13.52□□□□□ -0.25
HDAC4-204ENST00000446876 OR8J2Q8NGG1 315 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 OR56A1Q8NGH5 318 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 NEIL3Q8TAT5 605 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 SFXN5Q8TD22 340 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 ACTRT2Q8TDY3 377 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 TESCQ96BS2 214 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 DMRTA2Q96SC8 542 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 SERHL2Q9H4I8 314 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 GPATCH2Q9NW75 528 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 ACAD8Q9UKU7 415 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 KCNE3Q9Y6H6 103 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 ARHGAP21Q5T5U3 1957 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 OR14I1A6ND48 311 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 E9PLN8 166 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 BCKDKO14874 412 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 KCNK2O95069 426 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 C1QCP02747 245 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 S100A3P33764 101 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 CASP9P55211 416 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 CDSNQ15517 529 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 DCST1Q5T197 706 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 CDC73Q6P1J9 531 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 EPGNQ6UW88 154 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 APOOLQ6UXV4 268 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 MARCH3Q86UD3 253 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 PLCZ1Q86YW0 608 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 OR5D16Q8NGK9 328 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 CKAP2Q8WWK9 683 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 SARAFQ96BY9 339 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 VKORC1Q9BQB6 163 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 EBF4Q9BQW3 602 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 ACTRT3Q9BYD9 372 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 TP63Q9H3D4 680 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-204ENST00000446876 FAM120CQ9NX05 1096 aaKnown RBP13.51□□□□□ -0.25
HDAC4-204ENST00000446876 ALKBH4Q9NXW9 302 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 PPP4R1LQ9P1A2 415 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 MRTO4Q9UKD2 239 aaKnown RBP13.51□□□□□ -0.25
HDAC4-204ENST00000446876 KIAA1549Q9HCM3 1950 aa13.51□□□□□ -0.25
HDAC4-204ENST00000446876 UQCRHLA0A096LP55 91 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 NPIPA5A0A0B4J1W7 369 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 CYSRT1A8MQ03 144 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 NPIPA7E9PJI5 369 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 GMFGO60234 142 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 NPIPA8P0DM63 369 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 GP1BBP13224 206 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 RNF144AP50876 292 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-204ENST00000446876 PSMD4P55036 377 aaKnown RBP13.5□□□□□ -0.25
HDAC4-204ENST00000446876 POU6F2P78424 691 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-204ENST00000446876 CRYZQ08257 329 aaKnown RBP13.5□□□□□ -0.25
HDAC4-204ENST00000446876 MTFR2Q6P444 385 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 ZCCHC12Q6PEW1 402 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 MAMDC2Q7Z304 686 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-204ENST00000446876 C6orf120Q7Z4R8 191 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 GATSQ8NAP1 163 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 OR9I1Q8NGQ6 314 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 FAM110BQ8TC76 370 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 THOC1Q96FV9 657 aaKnown RBP13.5□□□□□ -0.25
HDAC4-204ENST00000446876 STACQ99469 402 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 INPP5KQ9BT40 448 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 BTBD2Q9BX70 525 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 DSN1Q9H410 356 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 PIGUQ9H490 435 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 GIN1Q9NXP7 522 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 MED11Q9P086 117 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 FAF1Q9UNN5 650 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-204ENST00000446876 ABCG2Q9UNQ0 655 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 FAM215AQ9Y5M1 114 aa13.5□□□□□ -0.25
HDAC4-204ENST00000446876 SETXQ7Z333 2677 aaKnown RBP13.5□□□□□ -0.25
HDAC4-204ENST00000446876 PRSS51A0A1B0GVH4 220 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 UBDO15205 165 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 CBR3O75828 277 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 OXSR1O95747 527 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-204ENST00000446876 IDO1P14902 403 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 BMP7P18075 431 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 CDKN2CP42773 168 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 IDH3AP50213 366 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.49□□□□□ -0.25
HDAC4-204ENST00000446876 DPY19L1Q2PZI1 675 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 PDCD4Q53EL6 469 aaKnown RBP13.49□□□□□ -0.25
HDAC4-204ENST00000446876 WLSQ5T9L3 541 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 ANXA8L1Q5VT79 327 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 RTL6Q6ICC9 239 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 RPTNQ6XPR3 784 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 OLIG3Q7RTU3 272 aa13.49□□□□□ -0.25
HDAC4-204ENST00000446876 ZNF808Q8N4W9 903 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms