RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MINDY2Q8NBR6 621 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF740Q8NDX6 193 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR2T29Q8NH02 315 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ABHD17AQ96GS6 310 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR4K3Q96R72 315 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 PSORS1C1Q9UIG5 152 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 BAG5Q9UL15 447 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 FAF1Q9UNN5 650 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 A3GALT2U3KPV4 340 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 TRGV8A0A0C4DH27 118 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 TFECO14948 347 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 SEMA7AO75326 666 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 TNFRSF21O75509 655 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 P04436 131 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 KLK1P06870 262 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 PRPS2P11908 318 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 TRPC1P48995 793 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 CCR4P51679 360 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 CRISP3P54108 245 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 C2orf80Q0P641 193 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 SLAMF1Q13291 335 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF846Q147U1 533 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 RGS21Q2M5E4 152 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 CDCP2Q5VXM1 449 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 FRG2Q64ET8 278 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZBTB46Q86UZ6 589 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZDHHC21Q8IVQ6 265 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 LRRC56Q8IYG6 542 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 CISD2Q8N5K1 135 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR2Y1Q8NGV0 311 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF501Q96CX3 271 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 MVB12AQ96EY5 273 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 CRELD1Q96HD1 420 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 FRG2BQ96QU4 278 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 PELI2Q9HAT8 420 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 RNF6Q9Y252 685 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 FAM32AQ9Y421 112 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 HNRNPCP07910 306 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 FPR1P21462 350 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 NR4A1P22736 598 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 FMO3P31513 532 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 HMGA2P52926 109 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 VBP1P61758 197 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 NCS1P62166 190 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 RPP38P78345 283 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 CSNK1G2P78368 415 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 TAGLNQ01995 201 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 GAB1Q13480 694 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 HEPACAMQ14CZ8 416 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 LAPTM4AQ15012 233 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 HSDL2Q6YN16 418 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 NCCRP1Q6ZVX7 275 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 OVCH1Q7RTY7 1134 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMPRSS9Q7Z410 1059 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 LYSMD2Q8IV50 215 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 TAGAPQ8N103 731 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 CLEC4FQ8N1N0 589 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMEM178AQ8NBL3 297 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 CLHC1Q8NHS4 586 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 SH3GL1Q99961 368 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 TBCDQ9BTW9 1192 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 CDADC1Q9BWV3 514 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 DPY30Q9C005 99 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 FBXL4Q9UKA2 621 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 ACAD8Q9UKU7 415 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 LSM2Q9Y333 95 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 ADAMTS9Q9P2N4 1935 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 UGDHO60701 494 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 GMNNO75496 209 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 TBX6O95947 436 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 ANXA4P09525 319 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 NR2F6P10588 404 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 PCSK2P16519 638 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 IGFBP5P24593 272 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 CD40LGP29965 261 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 SERPINB1P30740 379 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 DNAJA1P31689 397 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 KDELR2P33947 212 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 PCBP3P57721 371 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 IFITM2Q01629 132 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 PDE7AQ13946 482 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 MAPK11Q15759 364 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 PGS1Q32NB8 556 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMEM236Q5W0B7 351 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 ADNP2Q6IQ32 1131 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 NOXRED1Q6NXP6 359 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 PLEKHG7Q6ZR37 379 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 GALNT10Q86SR1 603 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 RPS19BP1Q86WX3 136 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 ADAMTS18Q8TE60 1221 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 WDR34Q96EX3 536 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF354BQ96LW1 612 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 RUBCNLQ9H714 662 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 GPR27Q9NS67 375 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 NUP214P35658 2090 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 ANGPTL1O95841 491 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 NUDT7P0C024 238 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 SPNP16150 400 aa6.88□□□□□ -1.31
CDC42BPA-208ENST00000442054 KLRB1Q12918 225 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms