RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ZNF367Q7RTV3 350 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 ZER1Q7Z7L7 766 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 CAMKK1Q8N5S9 505 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 BBS10Q8TAM1 723 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 COL26A1Q96A83 441 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 GPA33Q99795 319 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 FUZQ9BT04 418 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 CDCA4Q9BXL8 241 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 PCED1AQ9H1Q7 454 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 EVA1BQ9NVM1 165 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 HRASLS2Q9NWW9 162 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 CNOT2Q9NZN8 540 aaKnown RBP12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 CES1P1Q9UKY3 287 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 PEX16Q9Y5Y5 336 aa12.98□□□□□ -0.33
PTCHD3-201ENST00000438700 A0A1W2PRQ8 180 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 CENPXA8MT69 81 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 C2orf74A8MZ97 194 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 TNFRSF10AO00220 468 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 PROM1O43490 865 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 TNFSF14O43557 240 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 CSF2P04141 144 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 ZNF888P0CJ79 500 aaPredicted RBP12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 PVRP15151 417 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 BCKDHBP21953 392 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 SOX3P41225 446 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 LSSP48449 732 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 DEFA1P59665 94 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 DEFA3P59666 94 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 STXBP1P61764 594 aaKnown RBP12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 OLR1P78380 273 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 CDK10Q15131 360 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 ZNF544Q6NX49 715 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 BHLHB9Q6PI77 547 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 TMEM64Q6YI46 380 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 ASPGQ86U10 573 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 SLC34A3Q8N130 599 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 ZCCHC10Q8TBK6 192 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 CHAC2Q8WUX2 184 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 CRELD1Q96HD1 420 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 OR7D2Q96RA2 312 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 PRRG3Q9BZD7 231 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 TIGARQ9NQ88 270 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 SDK1Q7Z5N4 2213 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 FAM221BA6H8Z2 402 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 CCRL2O00421 344 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 TLX2O43763 284 aaPredicted RBP12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 LGI1O95970 557 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 TP53P04637 393 aaPredicted RBP12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 NME1P15531 152 aaKnown RBP12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 MPIP34949 423 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 MAZP56270 477 aaKnown RBP12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 SMIM11AP58511 58 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 PPP1CAP62136 330 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 PRR5P85299 388 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 HOXC5Q00444 222 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 GALK2Q01415 458 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 VRK2Q86Y07 508 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 TMEFF1Q8IYR6 380 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 NUP43Q8NFH3 380 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 KBTBD8Q8NFY9 601 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 OR7G1Q8NGA0 311 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 SPACA7Q96KW9 195 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 CEP19Q96LK0 163 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 BARHL1Q9BZE3 327 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 SLC25A19Q9HC21 320 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 RANGRFQ9HD47 186 aaPredicted RBP12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 CCDC59Q9P031 241 aaKnown RBP12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 SIT1Q9Y3P8 196 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 ENTPD2Q9Y5L3 495 aa12.97□□□□□ -0.33
PTCHD3-201ENST00000438700 VCANP13611 3396 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 MN1Q10571 1320 aaPredicted RBP12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 PRKYO43930 277 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 GPX5O75715 221 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 TYRP1P17643 537 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 CXCL12P48061 93 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 MAN2A2P49641 1150 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 SNRPGP62308 76 aaKnown RBP12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 CHRNEQ04844 493 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 ZNF91Q05481 1191 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 RGS1Q08116 209 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 SSX1Q16384 188 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 C12orf73Q69YU5 71 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 ZNF517Q6ZMY9 492 aaPredicted RBP12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 FAM92BQ6ZTR7 304 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 UBALD2Q8IYN6 164 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 SIMC1Q8NDZ2 872 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 SRFBP1Q8NEF9 429 aaKnown RBP12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 OR56A1Q8NGH5 318 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 C9orf43Q8TAL5 461 aaPredicted RBP12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 SFXN5Q8TD22 340 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 GPR151Q8TDV0 419 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 LMX1AQ8TE12 382 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 DOK4Q8TEW6 326 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 RSC1A1Q92681 617 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 ELP4Q96EB1 424 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 OR2A5Q96R48 311 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 SLC30A2Q9BRI3 323 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 SPATA5L1Q9BVQ7 753 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 BCL2L10Q9HD36 194 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms