RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GSTM5P46439 218 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 RFX3P48380 749 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 STARP49675 285 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 EMDP50402 254 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 PSMD4P55036 377 aaKnown RBP7.03□□□□□ -1.28
VPS50-204ENST00000438395 PKNOX1P55347 436 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 DSCR4P56555 118 aaPredicted RBP7.03□□□□□ -1.28
VPS50-204ENST00000438395 RPS3AP61247 264 aaKnown RBP7.03□□□□□ -1.28
VPS50-204ENST00000438395 ADAM8P78325 824 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 ZNF763Q0D2J5 394 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 MGAT2Q10469 447 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 FOXF2Q12947 444 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 LCP2Q13094 533 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 GANABQ14697 944 aaKnown RBP7.03□□□□□ -1.28
VPS50-204ENST00000438395 DECR1Q16698 335 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 ZNF628Q5EBL2 1059 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 POMZP3Q6PJE2 187 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 LCA5Q86VQ0 697 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 RELL1Q8IUW5 271 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 SLC22A9Q8IVM8 553 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 CNPY4Q8N129 248 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 CCNYL1Q8N7R7 359 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 WDSUB1Q8N9V3 476 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 WFDC11Q8NEX6 87 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 EFHD2Q96C19 240 aaPredicted RBP7.03□□□□□ -1.28
VPS50-204ENST00000438395 CTHRC1Q96CG8 243 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 C18orf12Q96KH6 178 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 C16orf45Q96MC5 204 aaPredicted RBP7.03□□□□□ -1.28
VPS50-204ENST00000438395 TBL1XR1Q9BZK7 514 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 AKTIPQ9H8T0 292 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 FOLH1BQ9HBA9 442 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 HHATLQ9HCP6 504 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 Q9N2J8 555 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 FANCFQ9NPI8 374 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 SLC35C2Q9NQQ7 365 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 JKAMPQ9P055 326 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 CLCF1Q9UBD9 225 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 ZNF639Q9UID6 485 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 FBXL2Q9UKC9 423 aa7.03□□□□□ -1.28
VPS50-204ENST00000438395 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS50-204ENST00000438395 F8W735 103 aaPredicted RBP7.02□□□□□ -1.29
VPS50-204ENST00000438395 PPP6CO00743 305 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 PLOD3O60568 738 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 SLITRK5O94991 958 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 PLGP00747 810 aaPredicted RBP7.02□□□□□ -1.29
VPS50-204ENST00000438395 GSTA1P08263 222 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 INHBBP09529 407 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 CTAGE8P0CG41 777 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 HK1P19367 917 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 ATP5F1P24539 256 aaPredicted RBP7.02□□□□□ -1.29
VPS50-204ENST00000438395 EVI2BP34910 448 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 HSD17B3P37058 310 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 MC3RP41968 323 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 SLCO1A2P46721 670 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 LHX2P50458 406 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 NCBP2P52298 156 aaKnown RBP eCLIP7.02□□□□□ -1.292e-7■■■■□ 26.1
VPS50-204ENST00000438395 PNLIPRP2P54317 469 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 GFRA1P56159 465 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 SIRPAP78324 504 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 NKX6-1P78426 367 aaPredicted RBP7.02□□□□□ -1.29
VPS50-204ENST00000438395 BTKQ06187 659 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 BCL2A1Q16548 175 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 SGCBQ16585 318 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 VPS26BQ4G0F5 336 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 CYP27C1Q4G0S4 372 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 CFAP157Q5JU67 520 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 Q5PR19 223 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 TCHHL1Q5QJ38 904 aaPredicted RBP7.02□□□□□ -1.29
VPS50-204ENST00000438395 SHEQ5VZ18 495 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 CLEC9AQ6UXN8 241 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 SZRD1Q7Z422 152 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 CTAGE4Q8IX94 777 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 MMGT1Q8N4V1 131 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 SIMC1Q8NDZ2 872 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 C16orf78Q8WTQ4 265 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 DCAKDQ8WVC6 231 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 PIGTQ969N2 578 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 GFM2Q969S9 779 aaKnown RBP7.02□□□□□ -1.29
VPS50-204ENST00000438395 CCDC126Q96EE4 140 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 ZNF845Q96IR2 970 aaPredicted RBP7.02□□□□□ -1.29
VPS50-204ENST00000438395 VSTM2LQ96N03 204 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 ZNF681Q96N22 645 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 TMEM237Q96Q45 408 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 CCL19Q99731 98 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 PIGQQ9BRB3 760 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 C1QTNF3Q9BXJ4 246 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 PINK1Q9BXM7 581 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 EBPLQ9BY08 206 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 FUT8Q9BYC5 575 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 PRRG4Q9BZD6 226 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 ACPTQ9BZG2 426 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 IQCGQ9H095 443 aaKnown RBP7.02□□□□□ -1.29
VPS50-204ENST00000438395 PLEKHF2Q9H8W4 249 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 ANKRA2Q9H9E1 313 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 UBTD1Q9HAC8 227 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 C3orf14Q9HBI5 128 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 FAM120CQ9NX05 1096 aaKnown RBP7.02□□□□□ -1.29
VPS50-204ENST00000438395 KLHL28Q9NXS3 571 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 HEY2Q9UBP5 337 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 ABCG2Q9UNQ0 655 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms