RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 WBP11Q9Y2W2 641 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 EML6Q6ZMW3 1958 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 A0A087WV62 115 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 RNF212BA8MTL3 300 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 HS3ST1O14792 307 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 OR4F21O95013 312 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CGAP01215 116 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 IL3P08700 152 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 RFX3P48380 749 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 NCBP2P52298 156 aaKnown RBP eCLIP11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CDH13P55290 713 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 C2orf80Q0P641 193 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 GALNT1Q10472 559 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 IMPG1Q17R60 797 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TCHHL1Q5QJ38 904 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TMEM201Q5SNT2 666 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ALKBH2Q6NS38 261 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FAM180BQ6P0A1 224 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SSX8Q7RTT4 187 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 METTL25Q8N6Q8 603 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CDYL2Q8N8U2 506 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FADS6Q8N9I5 356 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ARL8AQ96BM9 186 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 C1GALT1C1Q96EU7 318 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PLPPR2Q96GM1 343 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 GPR78Q96P69 363 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 BARX1Q9HBU1 254 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZBTB26Q9HCK0 441 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FARSBQ9NSD9 589 aaKnown RBP11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF701Q9NV72 531 aaPredicted RBP11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FAIMQ9NVQ4 179 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FAM120CQ9NX05 1096 aaKnown RBP11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 LAMP3Q9UQV4 416 aa11.03□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MANBAO00462 879 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 FADS1O60427 444 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CRCPO75575 148 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 IL33O95760 270 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TUBBP07437 444 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CD3EP07766 207 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ANXA4P09525 319 aaPredicted RBP11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 DDX5P17844 614 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 IL32P24001 234 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HSD17B3P37058 310 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZNF41P51814 821 aaPredicted RBP11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SUCLG1P53597 346 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 B3GALT5-AS1P59052 145 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 BTKQ06187 659 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 C2orf54Q08AI8 447 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 TNK1Q13470 666 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CAPRIN1Q14444 709 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 SLC22A9Q8IVM8 553 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HOMEZQ8IX15 550 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CEP70Q8NHQ1 597 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CDC26Q8NHZ8 85 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PPP1R14CQ8TAE6 165 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 C16orf78Q8WTQ4 265 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HSD17B8Q92506 261 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 AKAP1Q92667 903 aaKnown RBP eCLIP11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 FBXW5Q969U6 566 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HS6ST2Q96MM7 605 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 NSUN5Q96P11 429 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ACTR6Q9GZN1 396 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ACSS3Q9H6R3 686 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 L2HGDHQ9H9P8 463 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HEY2Q9UBP5 337 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 DMGDHQ9UI17 866 aaKnown RBP11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MPDZO75970 2070 aa11.02□□□□□ -0.65
HLA-DQB3-203ENST00000425319 AKAP6Q13023 2319 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 A0A1W2PP18 115 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GJE1A6NN92 205 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 H3BQF6 201 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 KLF4O43474 513 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ANGPTL1O95841 491 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ENO1P06733 434 aaKnown RBP11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RPS17P08708 135 aaKnown RBP11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZNF17P17021 662 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GPC1P35052 558 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GAS1P54826 345 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PKNOX1P55347 436 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 CARD18P57730 90 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 NAA20P61599 178 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RAC1P63000 192 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 LETMD1Q6P1Q0 360 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GPRIN3Q6ZVF9 776 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ESPNLQ6ZVH7 1005 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 MARCH3Q86UD3 253 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 LCA5Q86VQ0 697 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 PLD6Q8N2A8 252 aaKnown RBP11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 GPR151Q8TDV0 419 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZNF483Q8TF39 744 aaPredicted RBP11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ZBTB8AQ96BR9 441 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 HS3ST6Q96QI5 342 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RHNO1Q9BSD3 238 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 REG4Q9BYZ8 158 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 ANKRA2Q9H9E1 313 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 YAE1D1Q9NRH1 226 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 C19orf53Q9UNZ5 99 aaPredicted RBP11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RNF115Q9Y4L5 304 aa11.01□□□□□ -0.65
HLA-DQB3-203ENST00000425319 RNF223E7ERA6 249 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms