RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 FADS2O95864 444 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 RPN2P04844 631 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 NHLRC4P0CG21 123 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 UBCP0CG48 685 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 SMIM18P0DKX4 95 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CTSAP10619 480 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 MLNP12872 115 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 NDUFB7P17568 137 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CNR1P21554 472 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 SRD5A2P31213 254 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 UGT1A5P35504 534 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 FEN1P39748 380 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CDKN2CP42773 168 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 PSMD7P51665 324 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 RAB10P61026 200 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 MAGOHP61326 146 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 ADARB1P78563 741 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CDR2Q01850 454 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 KLC1Q07866 573 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 PNRC1Q12796 327 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 ORC2Q13416 577 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 KPNB1Q14974 876 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 FASTKD3Q14CZ7 662 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CYTH1Q15438 398 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CDKN3Q16667 212 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 PHKG1Q16816 387 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 KIAA1755Q5JYT7 1200 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 LYPLAL1Q5VWZ2 237 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 SLX4IPQ5VYV7 408 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 TIGD3Q6B0B8 471 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 FAM122CQ6P4D5 195 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 KCTD18Q6PI47 426 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 TMEM65Q6PI78 240 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 TTC33Q6PID6 262 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF782Q6ZMW2 699 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF841Q6ZN19 808 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 MON1BQ7L1V2 547 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 PID1Q7Z2X4 250 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 PAGE2Q7Z2X7 111 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 P4HA3Q7Z4N8 544 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 PRUNE1Q86TP1 453 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 ACOT1Q86TX2 421 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 GPBP1Q86WP2 473 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 DCUN1D3Q8IWE4 304 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 SLC38A6Q8IZM9 456 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CMTM8Q8IZV2 173 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 BEST3Q8N1M1 668 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 PELI3Q8N2H9 469 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 C1orf52Q8N6N3 182 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 MAB21L3Q8N8X9 362 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 MFSD9Q8NBP5 474 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CCDC112Q8NEF3 446 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 TTLQ8NG68 377 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 OR4L1Q8NH43 312 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 PIH1D2Q8WWB5 315 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 SORCS1Q8WY21 1168 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 P3H4Q92791 437 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 DAZLQ92904 295 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 SMARCD2Q92925 531 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 NAT6Q93015 286 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 ZNF333Q96JL9 665 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 SERAC1Q96JX3 654 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 ZFYVE19Q96K21 471 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 JSRP1Q96MG2 331 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CTRCQ99895 268 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CCDC3Q9BQI4 270 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 C7orf50Q9BRJ6 194 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 RAB11FIP5Q9BXF6 653 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 EGLN3Q9H6Z9 239 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 ASB8Q9H765 288 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CLK4Q9HAZ1 481 aaKnown RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 POLE4Q9NR33 117 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 RNF146Q9NTX7 359 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 PTTG3PQ9NZH4 202 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 NPAP1Q9NZP6 1156 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CLN8Q9UBY8 286 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 EMCNQ9ULC0 261 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 NSG2Q9Y328 171 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 KPTNQ9Y664 436 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 KCNE1BA0A087WTH5 132 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 TRBV5-7A0A0A0MS05 114 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ATP6AP2A0A1C7CYW4 349 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 MED19A0JLT2 244 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 TMEM213A2RRL7 107 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 OR2M5A3KFT3 312 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 GOLGA6L4A6NEF3 574 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ANTXRLA6NF34 631 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 CCDC182A6NF36 153 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 CCT8L1PA6NM43 557 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 YJEFN3A6XGL0 299 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 KCNU1A8MYU2 1149 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 NPIPA7E9PJI5 369 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 SLCO1B7G3V0H7 640 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 H0YIZ8 118 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 DLGAP1O14490 977 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 DENRO43583 198 aaKnown RBP3.34□□□□□ -1.87
SF3B1-205ENST00000424674 SEMA3DO95025 777 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 ETHE1O95571 254 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 WDPCPO95876 746 aa3.34□□□□□ -1.87
SF3B1-205ENST00000424674 TXNDC12O95881 172 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms