RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 NT5EP21589 574 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 SERPINB3P29508 390 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 TIA1P31483 386 aaKnown RBP eCLIP6.37□□□□□ -1.392e-6■■□□□ 12.1
HMGN1-205ENST00000419378 PTGER1P34995 402 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 DEKP35659 375 aaKnown RBP6.37□□□□□ -1.39
HMGN1-205ENST00000419378 RFC3P40938 356 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 ALDH9A1P49189 494 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 XKP51811 444 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 SLC37A1P57057 533 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF844Q08AG5 666 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 ACSM2AQ08AH3 577 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 FUT7Q11130 342 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 ASPHQ12797 758 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 MPEG1Q2M385 716 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF750Q32MQ0 723 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 KRT71Q3SY84 523 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 C1QL3Q5VWW1 255 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 ACSM2BQ68CK6 577 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 IL20RBQ6UXL0 311 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 RTL4Q6ZR62 310 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 SLC29A4Q7RTT9 530 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 SIAH3Q8IW03 269 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 POGLUT1Q8NBL1 392 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 TCP10LQ8TDR4 215 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 KLHL29Q96CT2 875 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 C11orf24Q96F05 449 aaPredicted RBP6.37□□□□□ -1.39
HMGN1-205ENST00000419378 NEIL1Q96FI4 390 aaPredicted RBP6.37□□□□□ -1.39
HMGN1-205ENST00000419378 SMC6Q96SB8 1091 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 TRMOQ9BU70 441 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 TMEM109Q9BVC6 243 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 FAIM2Q9BWQ8 316 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 GATA5Q9BWX5 397 aaPredicted RBP6.37□□□□□ -1.39
HMGN1-205ENST00000419378 EBPLQ9BY08 206 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 SHCBP1LQ9BZQ2 653 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 WWTR1Q9GZV5 400 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 DEPPQ9NTK1 212 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 SLC17A7Q9P2U7 560 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 HEY2Q9UBP5 337 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 CES1P1Q9UKY3 287 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 RAB21Q9UL25 225 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 NPIPA1Q9UND3 350 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 DLGAP4Q9Y2H0 992 aa6.37□□□□□ -1.39
HMGN1-205ENST00000419378 DIDO1Q9BTC0 2240 aaKnown RBP6.37□□□□□ -1.39
HMGN1-205ENST00000419378 UNC79Q9P2D8 2635 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 TRGV8A0A0C4DH27 118 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 A0A1B0GUH1 482 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 C2orf92A0A1B0GVN3 265 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 UBE2QL1A1L167 161 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 PINLYPA6NC86 204 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 WIPF3A6NGB9 483 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 DBX1A6NMT0 343 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 G3V3Y1 287 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 KLRC4-KLRK1H3BQV0 150 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 TFECO14948 347 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 AZIN1O14977 448 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 LRRTM2O43300 516 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 TYROBPO43914 113 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 SLC19A2O60779 497 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 TUSC2O75896 110 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 RSL1D1O76021 490 aaKnown RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 ATP1B1P05026 303 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 STSP08842 583 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 UROSP10746 265 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 CREB1P16220 341 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 PORP16435 677 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 CSNK2A2P19784 350 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 DDCP20711 480 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 FPR1P21462 350 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 ALDH3A1P30838 453 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 FEN1P39748 380 aaKnown RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 HSF1Q00613 529 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 BTKQ06187 659 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 RBPJQ06330 500 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF763Q0D2J5 394 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 DUSP8Q13202 625 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 RIN1Q13671 783 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 LTB4RQ15722 352 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 IMPG1Q17R60 797 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 PRICKLE4Q2TBC4 344 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF791Q3KP31 576 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 KRTCAP3Q53RY4 240 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 PIGGQ5H8A4 983 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 SPDYAQ5MJ70 313 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 C6orf163Q5TEZ5 329 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 CLEC6AQ6EIG7 209 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 FAM180BQ6P0A1 224 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 FAM111BQ6SJ93 734 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 OPN5Q6U736 354 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 FJX1Q86VR8 437 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 LRRC25Q8N386 305 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF615Q8N8J6 731 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 ZNF441Q8N8Z8 693 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 ZFP62Q8NB50 900 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 OR7G1Q8NGA0 311 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 SLC22A8Q8TCC7 542 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 C16orf78Q8WTQ4 265 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 SPACA9Q96E40 222 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 CNRIP1Q96F85 164 aaPredicted RBP6.36□□□□□ -1.39
HMGN1-205ENST00000419378 MAGED4Q96JG8 741 aa6.36□□□□□ -1.39
HMGN1-205ENST00000419378 MRGPRX4Q96LA9 322 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms