RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 C2CD3Q4AC94 2353 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 GOSR1O95249 250 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 PEPDP12955 493 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 GPC1P35052 558 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 SERPINB5P36952 375 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 IST1P53990 364 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 EEFSECP57772 596 aaKnown RBP22.94■■□□□ 1.26
VEGFA-208ENST00000417285 HSPB3Q12988 150 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 GANABQ14697 944 aaKnown RBP22.94■■□□□ 1.26
VEGFA-208ENST00000417285 GALNTL6Q49A17 601 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 RFTN2Q52LD8 501 aaPredicted RBP22.94■■□□□ 1.26
VEGFA-208ENST00000417285 FADS6Q8N9I5 356 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 ZFP28Q8NHY6 868 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 NRGNQ92686 78 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 INTS12Q96CB8 462 aaKnown RBP22.94■■□□□ 1.26
VEGFA-208ENST00000417285 PPCDCQ96CD2 204 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 RMND5BQ96G75 393 aaPredicted RBP22.94■■□□□ 1.26
VEGFA-208ENST00000417285 TSSK3Q96PN8 268 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 G6PC3Q9BUM1 346 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 DSN1Q9H410 356 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 HHATLQ9HCP6 504 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 CLCF1Q9UBD9 225 aa22.94■■□□□ 1.26
VEGFA-208ENST00000417285 TMEM233B4DJY2 109 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 AKAP10O43572 662 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 TBX19O60806 448 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 ASMTP46597 345 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 FOXF2Q12947 444 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 GLYR1Q49A26 553 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-208ENST00000417285 VPS26BQ4G0F5 336 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 ANKRD26P1Q6NSI1 321 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 CEP70Q8NHQ1 597 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 ZBED6CLQ96FA7 236 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-208ENST00000417285 FOXC2Q99958 501 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 TMEM109Q9BVC6 243 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 RBM24Q9BX46 236 aaKnown RBP22.93■■□□□ 1.26
VEGFA-208ENST00000417285 SH3BP4Q9P0V3 963 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.93■■□□□ 1.262e-10■■□□□ 14.1
VEGFA-208ENST00000417285 ST6GALNAC2Q9UJ37 374 aa22.93■■□□□ 1.26
VEGFA-208ENST00000417285 RPH3AQ9Y2J0 694 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-208ENST00000417285 V9GYY5 206 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-208ENST00000417285 HRNRQ86YZ3 2850 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-208ENST00000417285 PIP5K1BO14986 540 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 SCO2O43819 266 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 CRHP06850 196 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 PRPS2P11908 318 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 DDX5P17844 614 aaKnown RBP22.92■■□□□ 1.26
VEGFA-208ENST00000417285 GABRA3P34903 492 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 DIO3P55073 304 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 B3GALT5-AS1P59052 145 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 UGT3A2Q3SY77 523 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 OR2A2Q6IF42 318 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 ZCCHC23Q6ZST2 131 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 ZNF551Q7Z340 670 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-208ENST00000417285 CDC20BQ86Y33 519 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 GRAMD2AQ8IUY3 354 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 MREGQ8N565 214 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 OR2M3Q8NG83 312 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 DUSP19Q8WTR2 217 aa22.92■■□□□ 1.26
VEGFA-208ENST00000417285 CIDECQ96AQ7 238 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-208ENST00000417285 NF1P21359 2839 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 TMEM114B3SHH9 223 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 HCRTR2O43614 444 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 KCNH1O95259 989 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 HK1P19367 917 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 MAPK1P28482 360 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 MANFP55145 182 aaKnown RBP22.91■■□□□ 1.26
VEGFA-208ENST00000417285 PDE7AQ13946 482 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 R3HCC1LQ7Z5L2 792 aaKnown RBP22.91■■□□□ 1.26
VEGFA-208ENST00000417285 MEIOBQ8N635 442 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 CLHC1Q8NHS4 586 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 AGR3Q8TD06 166 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 MTERF3Q96E29 417 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 PPP3R2Q96LZ3 170 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 CXXC4Q9H2H0 198 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 MED11Q9P086 117 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 BAIAP2L1Q9UHR4 511 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 MED13LQ71F56 2210 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 MPDZO75970 2070 aa22.91■■□□□ 1.26
VEGFA-208ENST00000417285 DOCK7Q96N67 2140 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 ZNF500O60304 480 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-208ENST00000417285 DNASE1P24855 282 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 CPA2P48052 419 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 C17orf67Q0P5P2 114 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 ZNF385BQ569K4 471 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 FBXW10Q5XX13 1052 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 CHDHQ8NE62 594 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-208ENST00000417285 LINC01560Q8TB33 94 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 DACH2Q96NX9 599 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 TBL1XR1Q9BZK7 514 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 EQTNQ9NQ60 294 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 ACSS1Q9NUB1 689 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-208ENST00000417285 CCM2LQ9NUG4 571 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-208ENST00000417285 NTMQ9P121 344 aa22.9■■□□□ 1.26
VEGFA-208ENST00000417285 ABCA4P78363 2273 aa22.89■■□□□ 1.26
VEGFA-208ENST00000417285 B4DXG7 233 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 TYROBPO43914 113 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 BPGMP07738 259 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 BCKDHAP12694 445 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 CREB1P16220 341 aa22.89■■□□□ 1.25
VEGFA-208ENST00000417285 HPCAL1P37235 193 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms