RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 DUSP5Q16690 384 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.43□□□□□ -0.26
CHD1-202ENST00000414220 GXYLT1Q4G148 440 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 ATAD3BQ5T9A4 648 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 DESI1Q6ICB0 168 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 DOLPP1Q86YN1 238 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 PM20D2Q8IYS1 436 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 CLECL1Q8IZS7 167 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 ZNF527Q8NB42 609 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 OR14L1PQ8NHC6 308 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 FBXO30Q8TB52 745 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 SLC35G5Q96KT7 338 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 OR52B2Q96RD2 323 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 UBQLN4Q9NRR5 601 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 COQ3Q9NZJ6 369 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 DKKL1Q9UK85 242 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 TRIM33Q9UPN9 1127 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 MEMO1Q9Y316 297 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 BAHCC1Q9P281 2608 aa13.43□□□□□ -0.26
CHD1-202ENST00000414220 C2orf72A6NCS6 295 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 H3BNH8 94 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 ZNF195O14628 629 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 FADS1O60427 444 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 WDR1O75083 606 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 KCNK2O95069 426 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 ANP32DO95626 131 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 CELA3AP09093 270 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 ENDOUP21128 410 aaKnown RBP13.42□□□□□ -0.26
CHD1-202ENST00000414220 SRD5A2P31213 254 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 PTGER4P35408 488 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 PTGDSP41222 190 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 TRPC1P48995 793 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 IDH3AP50213 366 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 DSCR4P56555 118 aaPredicted RBP13.42□□□□□ -0.26
CHD1-202ENST00000414220 WNT3P56703 355 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 GANABQ14697 944 aaKnown RBP13.42□□□□□ -0.26
CHD1-202ENST00000414220 ZNF585AQ6P3V2 769 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 AAGABQ6PD74 315 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 FIGNL1Q6PIW4 674 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 XKRXQ6PP77 449 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 ENPP6Q6UWR7 440 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 MSANTD1Q6ZTZ1 278 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 ANKRD46Q86W74 232 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 MISPQ8IVT2 679 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 ZNF808Q8N4W9 903 aaPredicted RBP13.42□□□□□ -0.26
CHD1-202ENST00000414220 OR5AK3PQ8NH89 298 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 FAM110BQ8TC76 370 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 PHF10Q8WUB8 498 aaKnown RBP13.42□□□□□ -0.26
CHD1-202ENST00000414220 NUDT8Q8WV74 236 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 CDS1Q92903 461 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 CCDC115Q96NT0 180 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 OR7D2Q96RA2 312 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 UBQLN3Q9H347 655 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 RABEP2Q9H5N1 569 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 SERHLQ9NQF3 203 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 SDR39U1Q9NRG7 319 aaPredicted RBP13.42□□□□□ -0.26
CHD1-202ENST00000414220 GPATCH2Q9NW75 528 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 ALKBH4Q9NXW9 302 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 MRPS18CQ9Y3D5 142 aaKnown RBP13.42□□□□□ -0.26
CHD1-202ENST00000414220 POLEQ07864 2286 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 UBR5O95071 2799 aaPredicted RBP13.42□□□□□ -0.26
CHD1-202ENST00000414220 ZGRF1Q86YA3 2104 aa13.42□□□□□ -0.26
CHD1-202ENST00000414220 RFXANKO14593 260 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 NDUFB5O43674 189 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 KRT75O95678 551 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 ANGPTL1O95841 491 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 ACTL6AO96019 429 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 NGFRP08138 427 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 TROVE2P10155 538 aaKnown RBP eCLIP13.41□□□□□ -0.26
CHD1-202ENST00000414220 AGAP20933 346 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 TBXA2RP21731 343 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 ACVR2AP27037 513 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 POLR2JP52435 117 aaKnown RBP13.41□□□□□ -0.26
CHD1-202ENST00000414220 STX5Q13190 355 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 DCST2Q5T1A1 773 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 FNDC7Q5VTL7 733 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 ZNF621Q6ZSS3 439 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 C16orf62Q7Z3J2 963 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 MAVSQ7Z434 540 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 MRGPRGQ86SM5 289 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 IFNEQ86WN2 208 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 WDSUB1Q8N9V3 476 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 GOT1L1Q8NHS2 421 aaPredicted RBP13.41□□□□□ -0.26
CHD1-202ENST00000414220 DUSP19Q8WTR2 217 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 RNF138Q8WVD3 245 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 ABTB1Q969K4 478 aaPredicted RBP13.41□□□□□ -0.26
CHD1-202ENST00000414220 NTNG2Q96CW9 530 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 CCDC120Q96HB5 630 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 SLC35A5Q9BS91 424 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 SLC6A15Q9H2J7 730 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 TMEM45AQ9NWC5 275 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 ZNF446Q9NWS9 450 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 TAS2R10Q9NYW0 307 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 STOML1Q9UBI4 398 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 LIPGQ9Y5X9 500 aa13.41□□□□□ -0.26
CHD1-202ENST00000414220 FAM234BA2RU67 622 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 CCDC154A6NI56 674 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 AHRRA9YTQ3 701 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 ALG1L2C9J202 215 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 ZG16O60844 167 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms