RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 MSI2Q96DH6 328 aaKnown RBP10.4□□□□□ -0.75
CACNA1C-216ENST00000399638 CENPNQ96H22 339 aaPredicted RBP10.4□□□□□ -0.75
CACNA1C-216ENST00000399638 TSGA13Q96PP4 275 aa10.4□□□□□ -0.75
CACNA1C-216ENST00000399638 MRI1Q9BV20 369 aa10.4□□□□□ -0.75
CACNA1C-216ENST00000399638 RDH14Q9HBH5 336 aa10.4□□□□□ -0.75
CACNA1C-216ENST00000399638 MYNNQ9NPC7 610 aa10.4□□□□□ -0.75
CACNA1C-216ENST00000399638 IGLV3-22A0A075B6J6 115 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 H7C2Y5 167 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 SOCS5O75159 536 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 EIF5AP63241 154 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 GNMTQ14749 295 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 ZNF775Q96BV0 537 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 PRRX2Q99811 253 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 CXorf21Q9HAI6 301 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 FAIMQ9NVQ4 179 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 TESQ9UGI8 421 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 NOSIPQ9Y314 301 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 RNF11Q9Y3C5 154 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 ANKRD61A6NGH8 418 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 RNASET2O00584 256 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 ZNF888P0CJ79 500 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 CRYZQ08257 329 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 GLT8D1Q68CQ7 371 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 OR4C11Q6IEV9 310 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 MARCH9Q86YJ5 346 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 ACBD4Q8NC06 268 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 GLB1L3Q8NCI6 653 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 DEFB124Q8NES8 71 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 UNKLQ9H9P5 680 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 TMEM248Q9NWD8 314 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 A0A0A6YYC8 382 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 I3L1I5 382 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 MAPK3P27361 379 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 RBMXP38159 391 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 EMP3P54852 163 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 CDK6Q00534 326 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 RTP2Q5QGT7 225 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 SLC22A25Q6T423 547 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 TRIM46Q7Z4K8 759 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 SLC37A3Q8NCC5 494 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 STT3BQ8TCJ2 826 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 KCNN1Q92952 543 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 RHBDF1Q96CC6 855 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 IL4I1Q96RQ9 567 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 TUBA1CQ9BQE3 449 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 URM1Q9BTM9 101 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 DEFB127Q9H1M4 99 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 FOLH1BQ9HBA9 442 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 UBR1Q8IWV7 1749 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 CNTRLQ7Z7A1 2325 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 CBY3A6NI87 242 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 AGFG2O95081 481 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 APEHP13798 732 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 CSNK1A1P48729 337 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 FXYD4P59646 89 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 KIAA0930Q6ICG6 404 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 SMIM12Q96EX1 92 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 TPT1P8Q9HAU6 139 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 FAM230AA0A1W2PPH8 454 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 AQP12BA6NM10 295 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 AGPAT2O15120 278 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 ATXN7O15265 892 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 PIGRP01833 764 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 DBHP09172 617 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 SLC2A2P11168 524 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 SERTAD2Q14140 314 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 CLINT1Q14677 625 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 METTL2BQ6P1Q9 378 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 UNC5DQ6UXZ4 953 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 MAMDC2Q7Z304 686 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 SLC22A16Q86VW1 577 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 AQP12AQ8IXF9 295 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 LRRC18Q8N456 261 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 TOMM5Q8N4H5 51 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 BPIFCQ8NFQ6 507 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 OR4N2Q8NGD1 307 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 ADAMTS19Q8TE59 1207 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 DTD1Q8TEA8 209 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 FCRL5Q96RD9 977 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 APOBEC3GQ9HC16 384 aaKnown RBP10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 RHCGQ9UBD6 479 aa10.39□□□□□ -0.75
CACNA1C-216ENST00000399638 SERTM2A0A1B0GWG4 89 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 FOXO6A8MYZ6 492 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 ORC5O43913 435 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 CNIH1O95406 144 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 CD9P21926 228 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 NAA10P41227 235 aaPredicted RBP10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 ZNF33AQ06730 810 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 OR5M10Q6IEU7 315 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 ZNF440Q8IYI8 595 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 ZNF781Q8N8C0 355 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 WDR20Q8TBZ3 569 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 KIAA1191Q96A73 305 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 DCLRE1CQ96SD1 692 aaKnown RBP10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 PIGVQ9NUD9 493 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 MGAT4CQ9UBM8 478 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 PADI1Q9ULC6 663 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 SLC6A14Q9UN76 642 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 NRXN3Q9Y4C0 1643 aa10.38□□□□□ -0.75
CACNA1C-216ENST00000399638 F7P08709 466 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms