RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ZNF155Q12901 538 aaPredicted RBP15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 NR2C2APQ86WQ0 139 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 GALNT6Q8NCL4 622 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 CCL4L1Q8NHW4 92 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 NEIL3Q8TAT5 605 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 RASSF5Q8WWW0 418 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 CITED4Q96RK1 184 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 WACQ9BTA9 647 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC17A9Q9BYT1 436 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 GALNT9Q9HCQ5 603 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 GDE1Q9NZC3 331 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 CSNK1G3Q9Y6M4 447 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 ZC3H12DA2A288 527 aaKnown RBP15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 RNGTTO60942 597 aaKnown RBP15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 CDH11P55287 796 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 TFF2Q03403 129 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 FAPQ12884 760 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 ITPRIPL2Q3MIP1 535 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC25A30Q5SVS4 291 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 VASNQ6EMK4 673 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 FBXL6Q8N531 539 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 OR52E1Q8NGJ3 308 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 AP3S1Q92572 193 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 TSACCQ96A04 125 aaPredicted RBP15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 RGMAQ96B86 450 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 MED18Q9BUE0 208 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 MENTQ9BUN1 341 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 RNF32Q9H0A6 362 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 SLA2Q9H6Q3 261 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 MRPS30Q9NP92 439 aaKnown RBP15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 FGF20Q9NP95 211 aaPredicted RBP15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 GSTK1Q9Y2Q3 226 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 TRANK1O15050 2925 aa15.22■□□□□ 0.03
NKX3-1-201ENST00000380871 IGKV1-8A0A0C4DH67 115 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 GABRPO00591 440 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 PIP5K1CO60331 668 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 CHRNB1P11230 501 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 MINDY4Q4G0A6 757 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 KIAA1324Q6UXG2 1013 aaKnown RBP15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 NKAIN4Q8IVV8 208 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 ARIH2OSQ8N7S6 290 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 OR7G1Q8NGA0 311 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 RIPOR3Q96MK2 946 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 IRF2BPLQ9H1B7 796 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC35C2Q9NQQ7 365 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 SNRNP200O75643 2136 aaKnown RBP15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 FAM240BA0A1B0GVZ2 78 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 LYRM1O43325 122 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 FAM157BP0CG42 384 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 EVI2BP34910 448 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 RNF144AP50876 292 aaPredicted RBP15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 AGFG1P52594 562 aaKnown RBP15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 ERVK-21P61565 698 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 ENPP7Q6UWV6 458 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 RAB42Q8N4Z0 105 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 SPRYD4Q8WW59 207 aaPredicted RBP15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 ISG20L2Q9H9L3 353 aaKnown RBP15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 FGF22Q9HCT0 170 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 RBFOX1Q9NWB1 397 aaKnown RBP15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 CHST2Q9Y4C5 530 aa15.21■□□□□ 0.03
NKX3-1-201ENST00000380871 PLOD3O60568 738 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 CPN2P22792 545 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 PPP2CBP62714 309 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 PPP3R1P63098 170 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 PPP2CAP67775 309 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 REEP5Q00765 189 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 CHRNEQ04844 493 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 CLPPQ16740 277 aaPredicted RBP15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 OR4C11Q6IEV9 310 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 NUDT18Q6ZVK8 323 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 ARSGQ96EG1 525 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 CNRIP1Q96F85 164 aaPredicted RBP15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 TRPV5Q9NQA5 729 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 ATG4BQ9Y4P1 393 aa15.21■□□□□ 0.02
NKX3-1-201ENST00000380871 SOCS6O14544 535 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 EML2O95834 649 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 BCL6P41182 706 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 DLX2Q07687 328 aaPredicted RBP15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 C18orf63Q68DL7 685 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 CD200R1LQ6Q8B3 271 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 KLBQ86Z14 1044 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 C7orf57Q8NEG2 295 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 OR4M1Q8NGD0 313 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 OR2A1Q8NGT9 310 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 OR10G6Q8NH81 332 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 SUN3Q8TAQ9 357 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 SNAPC3Q92966 411 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 TBX5Q99593 518 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 SOSTQ9BQB4 213 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 SYNPO2LQ9H987 977 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 SLC28A3Q9HAS3 691 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 SCN2AQ99250 2005 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 A0A0A6YYD5 115 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 GSAPA4D1B5 854 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 LANCL1O43813 399 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 ZNF780AO75290 641 aaPredicted RBP15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 CEACAM5P06731 702 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 FUT1P19526 365 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 EVX1P49640 407 aa15.2■□□□□ 0.02
NKX3-1-201ENST00000380871 RPA4Q13156 261 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms