RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 KIR3DL1P43629 444 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 MAN2A2P49641 1150 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 MRPS22P82650 360 aaKnown RBP13.37□□□□□ -0.27
SF3B5-201ENST00000367569 PRR5P85299 388 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 DECR1Q16698 335 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 SMU1Q2TAY7 513 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 GRAMD1BQ3KR37 738 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 EMC4Q5J8M3 183 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 TBCELQ5QJ74 424 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 DCST1Q5T197 706 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 ARHGAP11AQ6P4F7 1023 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 YRDCQ86U90 279 aaKnown RBP13.37□□□□□ -0.27
SF3B5-201ENST00000367569 PACS2Q86VP3 889 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 KIRREL3Q8IZU9 778 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 COX18Q8N8Q8 333 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 OR5D16Q8NGK9 328 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 OR9I1Q8NGQ6 314 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 OR1J4Q8NGS1 313 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 TMCO6Q96DC7 493 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 TMEM41AQ96HV5 264 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 LURAP1Q96LR2 239 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 DMRTA2Q96SC8 542 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 PRPF18Q99633 342 aaKnown RBP13.37□□□□□ -0.27
SF3B5-201ENST00000367569 EBF4Q9BQW3 602 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 SERHL2Q9H4I8 314 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 GIN1Q9NXP7 522 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 FBXL2Q9UKC9 423 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 WIF1Q9Y5W5 379 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 KCNE3Q9Y6H6 103 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 ARHGAP21Q5T5U3 1957 aa13.37□□□□□ -0.27
SF3B5-201ENST00000367569 ADGRG4Q8IZF6 3080 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 E9PBE3 544 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 PRRG2O14669 202 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 UTS2O95399 124 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 IGHG3P01860 377 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 ALOX5P09917 674 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 DDX5P17844 614 aaKnown RBP13.36□□□□□ -0.27
SF3B5-201ENST00000367569 CCT3P49368 545 aaKnown RBP13.36□□□□□ -0.27
SF3B5-201ENST00000367569 C21orf58P58505 322 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 SF3A3Q12874 501 aaKnown RBP eCLIP13.36□□□□□ -0.27
SF3B5-201ENST00000367569 EFR3AQ14156 821 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 SLC10A1Q14973 349 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 HYAL4Q2M3T9 481 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 TIGD3Q6B0B8 471 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 OGFOD2Q6N063 350 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 ZNF585AQ6P3V2 769 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 RGS9BPQ6ZS82 235 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 MARCH3Q86UD3 253 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 HOMEZQ8IX15 550 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 MARVELD2Q8N4S9 558 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 CDRT4Q8N9R6 151 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 SECISBP2Q96T21 854 aaKnown RBP13.36□□□□□ -0.27
SF3B5-201ENST00000367569 INPP5KQ9BT40 448 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 ALKBH4Q9NXW9 302 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 GPR45Q9Y5Y3 372 aa13.36□□□□□ -0.27
SF3B5-201ENST00000367569 PHF3Q92576 2039 aaKnown RBP13.35□□□□□ -0.27
SF3B5-201ENST00000367569 ANKRD33BA6NCL7 494 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 KDM4EB2RXH2 506 aaPredicted RBP13.35□□□□□ -0.27
SF3B5-201ENST00000367569 E9PLN8 166 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 NKX2-2O95096 273 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 SNX4O95219 450 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 KCNH1O95259 989 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 IL33O95760 270 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 CDKN2CP42773 168 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 PRIM2P49643 509 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 PNLIPRP2P54317 469 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 MLC1Q15049 377 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 LSM12Q3MHD2 195 aaKnown RBP13.35□□□□□ -0.27
SF3B5-201ENST00000367569 SLC30A6Q6NXT4 461 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 SPATA19Q7Z5L4 167 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 CAMKMTQ7Z624 323 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 LSRQ86X29 649 aaPredicted RBP13.35□□□□□ -0.27
SF3B5-201ENST00000367569 WDSUB1Q8N9V3 476 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 FAM83FQ8NEG4 500 aaPredicted RBP13.35□□□□□ -0.27
SF3B5-201ENST00000367569 OR56A1Q8NGH5 318 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 CEP70Q8NHQ1 597 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 PHF10Q8WUB8 498 aaKnown RBP13.35□□□□□ -0.27
SF3B5-201ENST00000367569 MAELQ96JY0 434 aaKnown RBP13.35□□□□□ -0.27
SF3B5-201ENST00000367569 SLC35G5Q96KT7 338 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 C7orf26Q96N11 449 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 VKORC1Q9BQB6 163 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 UBQLN3Q9H347 655 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 NEUROD4Q9HD90 331 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 GPATCH2Q9NW75 528 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 PPP4R1LQ9P1A2 415 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 DKKL1Q9UK85 242 aa13.35□□□□□ -0.27
SF3B5-201ENST00000367569 RPH3AQ9Y2J0 694 aaPredicted RBP13.35□□□□□ -0.27
SF3B5-201ENST00000367569 SLCO1B7G3V0H7 640 aa13.34□□□□□ -0.27
SF3B5-201ENST00000367569 AQP7O14520 342 aa13.34□□□□□ -0.27
SF3B5-201ENST00000367569 ABCB7O75027 752 aa13.34□□□□□ -0.27
SF3B5-201ENST00000367569 KCNK2O95069 426 aa13.34□□□□□ -0.27
SF3B5-201ENST00000367569 GSNP06396 782 aa13.34□□□□□ -0.27
SF3B5-201ENST00000367569 IFI6P09912 130 aa13.34□□□□□ -0.27
SF3B5-201ENST00000367569 S100A3P33764 101 aa13.34□□□□□ -0.27
SF3B5-201ENST00000367569 MAP3K8P41279 467 aa13.34□□□□□ -0.27
SF3B5-201ENST00000367569 CLNS1AP54105 237 aaKnown RBP13.34□□□□□ -0.27
SF3B5-201ENST00000367569 GAS1P54826 345 aa13.34□□□□□ -0.27
SF3B5-201ENST00000367569 AQP5P55064 265 aa13.34□□□□□ -0.27
SF3B5-201ENST00000367569 POU6F2P78424 691 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms