RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 WWOXQ9NZC7 414 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 SLCO1B1Q9Y6L6 691 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 GON4LQ3T8J9 2241 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 ABCA7Q8IZY2 2146 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 TDRD15B5MCY1 1934 aaKnown RBP4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 TRBV2A0A0J9YWF9 115 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 GOLGA8IPA6NC78 632 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 SERINC4A6NH21 518 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 GOLGA8JA6NMD2 632 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 WASH3PC4AMC7 463 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 SLCO1B7G3V0H7 640 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 SLC28A1O00337 649 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 LAD1O00515 517 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 PRB1P04280 392 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 SKILP12757 684 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 GAP43P17677 238 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 ITGB6P18564 788 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 RPL10AP62906 217 aaKnown RBP4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 TFAMQ00059 246 aaKnown RBP4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 KDSRQ06136 332 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 ZNF33AQ06730 810 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 CNTN1Q12860 1018 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 TAB1Q15750 504 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 CUZD1Q86UP6 607 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 TMEM25Q86YD3 366 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 FBXW8Q8N3Y1 598 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 CSGALNACT2Q8N6G5 542 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 SIDT2Q8NBJ9 832 aaKnown RBP4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 TRPV3Q8NET8 790 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 OR13C5Q8NGS8 318 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 OR6S1Q8NH40 331 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 OR4A16Q8NH70 328 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 FAM76AQ8TAV0 307 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 MAPK15Q8TD08 544 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 SLC13A3Q8WWT9 602 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 MYLPFQ96A32 169 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 DNAJC19Q96DA6 116 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 MAGED4Q96JG8 741 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 LURAP1Q96LR2 239 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 MRPL45Q9BRJ2 306 aaKnown RBP4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 CBWD1Q9BRT8 395 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 TMEM245Q9H330 911 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 PARVGQ9HBI0 331 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 IL37Q9NZH6 218 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 UXTQ9UBK9 157 aaPredicted RBP4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 UBQLN2Q9UHD9 624 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 PILRAQ9UKJ1 303 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 PLCL2Q9UPR0 1127 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 EXOC7Q9UPT5 735 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 RPH3AQ9Y2J0 694 aaPredicted RBP4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 SH3GLB1Q9Y371 365 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 STRAPQ9Y3F4 350 aaKnown RBP4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 CPQQ9Y646 472 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 HECTD1Q9ULT8 2610 aa4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 ASCC3Q8N3C0 2202 aaKnown RBP4.81□□□□□ -1.64
RNU4-39P-201ENST00000362455 NKX6-3A6NJ46 265 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 C15orf61A6NNL5 157 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 F8VP50 259 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 H0YCG3 227 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 CLDN5O00501 218 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 IKBKBO14920 756 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 COCHO43405 550 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 HUS1O60921 280 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 LRCH4O75427 683 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 GMNNO75496 209 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 TRIM16O95361 564 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 CISD3P0C7P0 127 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 B4GALT1P15291 398 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 AREGP15514 252 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 AHCYP23526 432 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 ACKR3P25106 362 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 TNFRSF4P43489 277 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 LUMP51884 338 aaPredicted RBP4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 BPIFB3P59826 476 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 SNRPD1P62314 119 aaKnown RBP4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 NOP14P78316 857 aaKnown RBP4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 IL1RL1Q01638 556 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 WASHC5Q12768 1159 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 TSTA3Q13630 321 aaPredicted RBP4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 SPHARQ15513 63 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 EOGTQ5NDL2 527 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 LYPLAL1Q5VWZ2 237 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 PWWP2BQ6NUJ5 590 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 BHLHB9Q6PI77 547 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 PAQR9Q6ZVX9 377 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 BBS7Q8IWZ6 715 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 KLHDC8BQ8IXV7 354 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 TMEM86AQ8N2M4 240 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 SLC43A2Q8N370 569 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 LRRC52Q8N7C0 313 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 DDHD1Q8NEL9 900 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 OR4D10Q8NGI6 311 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 OR52E1Q8NGJ3 308 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 SMPDL3AQ92484 453 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 PCED1BQ96HM7 432 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 GMPPAQ96IJ6 420 aaPredicted RBP4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 LRR1Q96L50 414 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 KCNK16Q96T55 309 aa4.8□□□□□ -1.64
RNU4-39P-201ENST00000362455 SYT15Q9BQS2 421 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 227 ms