RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SUCNR1Q9BXA5 334 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 EBPLQ9BY08 206 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ELOVL4Q9GZR5 314 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 INPP5EQ9NRR6 644 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 THSD1Q9NS62 852 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 DKKL1Q9UK85 242 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CAMK2AQ9UQM7 478 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GOLT1BQ9Y3E0 138 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 DNMT3AQ9Y6K1 912 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 MON2Q7Z3U7 1717 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ARL5CA6NH57 179 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 SEC14L6B5MCN3 397 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 J3KRW8 73 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GPR171O14626 319 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ZNF250P15622 560 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 SOX9P48436 509 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CLCNKAP51800 687 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 LIMK1P53667 647 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PAFAH1B3Q15102 231 aaKnown RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 PAGE3Q5JUK9 113 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ZDHHC20Q5W0Z9 365 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CATSPERGQ6ZRH7 1159 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 SLC16A12Q6ZSM3 486 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 COX15Q7KZN9 410 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 C9orf62Q8N4C0 152 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 OR1J1Q8NGS3 322 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CREB3L4Q8TEY5 395 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 NOL4LQ96MY1 436 aaPredicted RBP4.78□□□□□ -1.64
SKP1-202ENST00000353411 TECTBQ96PL2 329 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 SAMD10Q9BYL1 202 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GABARAPL1Q9H0R8 117 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 METTL9Q9H1A3 318 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 RASD1Q9Y272 281 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TNFSF13BQ9Y275 285 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 EEF1E1-BLOC1S5C9J1V9 151 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TPST2O60704 377 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CBX7O95931 251 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PRSS3P35030 304 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 MGAT3Q09327 533 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 RAET1GQ6H3X3 334 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 RNF44Q7L0R7 432 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 LRRC52Q8N7C0 313 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 NTAN1Q96AB6 310 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TM6SF2Q9BZW4 377 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 APMAPQ9HDC9 416 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 POLLQ9UGP5 575 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 POLR1DQ9Y2S0 133 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 POMT1Q9Y6A1 747 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CUL9Q8IWT3 2517 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 YDJCA8MPS7 323 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 OR12D2P58182 307 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 TAS2R19P59542 299 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 SH3BP2P78314 561 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CREB5Q02930 508 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PRKCZQ05513 592 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GOLGA7Q7Z5G4 137 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PIGZQ86VD9 579 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 SLC22A15Q8IZD6 547 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 PELI3Q8N2H9 469 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 STEAP2Q8NFT2 490 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 HS6ST2Q96MM7 605 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CMTM3Q96MX0 182 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 GPR137Q96N19 417 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 CDK15Q96Q40 435 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 OR11A1Q9GZK7 315 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 NDUFB11Q9NX14 153 aa4.78□□□□□ -1.64
SKP1-202ENST00000353411 ABHD14A-ACY1A0A1B0GW23 586 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 SPATA31C2B4DYI2 1134 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 MSCO60682 206 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 SH3BGRLO75368 114 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 PMS2P2O95744 297 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 EGFP01133 1207 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 OPN1SWP03999 348 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 SFTPBP07988 381 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 PF4V1P10720 104 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 TMEM11P17152 192 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 ZNF41P51814 821 aaPredicted RBP4.77□□□□□ -1.65
SKP1-202ENST00000353411 SOX10P56693 466 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 TAS2R60P59551 318 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 ZNF280AP59817 542 aaPredicted RBP4.77□□□□□ -1.65
SKP1-202ENST00000353411 UPP1Q16831 310 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 MOGAT2Q3SYC2 334 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 FRG2Q64ET8 278 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 MED27Q6P2C8 311 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 PAQR3Q6TCH7 311 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 ACOT7LQ6ZUV0 252 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 MCATQ8IVS2 390 aaKnown RBP4.77□□□□□ -1.65
SKP1-202ENST00000353411 SIAH3Q8IW03 269 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 LRRC56Q8IYG6 542 aaPredicted RBP4.77□□□□□ -1.65
SKP1-202ENST00000353411 OR4K2Q8NGD2 314 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 OR51G2Q8NGK0 314 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 OR13C2Q8NGS9 318 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 TFAP2BQ92481 460 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 EXTL1Q92935 676 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 FRG2BQ96QU4 278 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 TAAR1Q96RJ0 339 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 ULBP1Q9BZM6 244 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 MRPL15Q9P015 296 aaKnown RBP4.77□□□□□ -1.65
SKP1-202ENST00000353411 CRYBG1Q9Y4K1 1723 aa4.77□□□□□ -1.65
SKP1-202ENST00000353411 HTR1AP08908 422 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms