RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 D6RAR5 112 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 F8W036 122 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 AIPO00170 330 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 GAPDHSO14556 408 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 RLN1P04808 185 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 HSD3B1P14060 373 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 DRD2P14416 443 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 NPR2P20594 1047 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 S100A11P31949 105 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 RAD52P43351 418 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 GK2Q14410 553 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 SLC36A2Q495M3 483 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 GPR33Q49SQ1 333 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 SLC22A10Q63ZE4 541 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 IKBIPQ70UQ0 350 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 C11orf96Q7Z7L8 435 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 METTL3Q86U44 580 aaKnown RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 NR2C2APQ86WQ0 139 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 LSRQ86X29 649 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 RASGRP3Q8IV61 690 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 C2orf73Q8N5S3 287 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 OR4D11Q8NGI4 311 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 WDR20Q8TBZ3 569 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 C2CD4CQ8TF44 421 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 FAM46AQ96IP4 442 aaKnown RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 ADAM2Q99965 735 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 FGF20Q9NP95 211 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 PRDM9Q9NQV7 894 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 SLC39A1Q9NY26 324 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 ERVK-19Q9WJR5 959 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 DAPL1A0PJW8 107 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 TUBAL3A6NHL2 446 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 DISC1C4P0D8 188 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 FRS3O43559 492 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 TBL1XO60907 577 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 GJB5O95377 273 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 GDNFP39905 211 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 OPRD1P41143 372 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 RFX3P48380 749 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 MELKQ14680 651 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 HLXQ14774 488 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 RNLSQ5VYX0 342 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 C18orf63Q68DL7 685 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 FAAP20Q6NZ36 180 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 SERPINA12Q8IW75 414 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 BBS1Q8NFJ9 593 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 BBS10Q8TAM1 723 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 C16orf78Q8WTQ4 265 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 YIPF5Q969M3 257 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 EXOSC8Q96B26 276 aaKnown RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 TSNAXQ99598 290 aaKnown RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 GPA33Q99795 319 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 SLC6A16Q9GZN6 736 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 CXorf36Q9H7Y0 433 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 MBD1Q9UIS9 605 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 PPP2R3BQ9Y5P8 575 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 GREB1Q4ZG55 1949 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 PRRC2BQ5JSZ5 2229 aaKnown RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 J3QLW9 94 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 M0QZQ0 153 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 FMO6PO60774 539 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SEMA7AO75326 666 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ATG12O94817 140 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 OR5F1O95221 314 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 APOC1P02654 83 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 MRPL3P09001 348 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 FURINP09958 794 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ACP5P13686 325 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 GNSP15586 552 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF19P17023 458 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 PVALBP20472 110 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 MAPK9P45984 424 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 PREPP48147 710 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 MTNR1BP49286 362 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 AP1S2P56377 157 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 PCBP3P57721 371 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SLBPQ14493 270 aaKnown RBP eCLIP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 NDUFA9Q16795 377 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 CCSMST1Q4G0I0 132 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 METTL11BQ5VVY1 283 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 GSG1LQ6UXU4 331 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 NHLRC1Q6VVB1 395 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 TMUB2Q71RG4 321 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 PM20D2Q8IYS1 436 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ZFP82Q8N141 532 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 HDDC3Q8N4P3 179 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ARMC5Q96C12 935 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 WDR89Q96FK6 387 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF354BQ96LW1 612 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 NKX6-2Q9C056 277 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 KCND3Q9UK17 655 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 TRPV2Q9Y5S1 764 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ZC3H12DA2A288 527 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 AGAP14A8MT82 685 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SOCS6O14544 535 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 CXCL11O14625 94 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 CREBL2O60519 120 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 REM1O75628 298 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 RECKO95980 971 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms